Syngnathoides biaculeatus (alligator pipefish): 133515237
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Entry
133515237 CDS
T09681
Symbol
cacna1bb
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04010
MAPK signaling pathway
sbia04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133515237 (cacna1bb)
04020 Calcium signaling pathway
133515237 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133515237 (cacna1bb)
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133515237 (cacna1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
133515237
NCBI-ProteinID:
XP_061703543
LinkDB
All DBs
Position
17:complement(5855887..6044377)
Genome browser
AA seq
2382 aa
AA seq
DB search
MARFTEDHPTRYGGGTGGSSSGGRGAPGAGRGGARGGGAPGGQRMYKQTMAQRARTMALY
NPNPVKQNCLTVNRSLFIFREDNLIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLP
ASDKTPMSERLDDTEPYFIGIFCFEAAIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGIL
AKVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAI
IGVEFYMGKFHTTCFNTDTGEKAAEWPCGLEPPARLCPNGTQCKEYWTGPNFGITNFDNI
LFAVLTVFQCITMEGWVDILYSTNDVAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFA
KERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDEIAEEKSPLDGAWYKR
KQNLPVLKRSKNKKGKNDLISAEEGDDPFVDISSVAPPGSPFGRASVKSSTKMDSSSYFR
RKEKRIRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYDQPEWLTTALYTAEFVFLGLF
LTEMTLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWDMIKPGASFGISVLRALRLLRI
FKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTN
FDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYTLLNVFL
AIAVDNLANAQELTKDEEEQEEAANKKLALQKALEVKEVSPMSAANISIAAFVKQNRDAL
SRRSSINSIQSLKEQQRAAKTMSVWEQRTNQLRRHNMRASSEALFNELDPEERLRLSSVL
HLHPDMKTHLDRPLVVESRNSDDPNRLPEEGQQDSTGDNFHSHTRKHHRHRDRNGEGRDG
GDGRATRHHTHHSRSKDHNSNGAQSKERRGESSHSRDEGQRRRRHHHTGSPEEEISDVRG
GGEERGHRHHHSHRTPKEGNGTLANGAHGDRRVRERGGDGNGERKARCSRMVRAQSTLDE
NESKTCKKGHREMQSDGEEEGLATSQLSLGDKQEDADNQKNSTRASQAGLNSNTIHIPVT
ITAPPGETTIIPMNNIDSGNFRVNEEKKALEEDDAVSRPRQILPYSSMFIFGQTNPVRRL
CHYVVNLRYFEMCILMVITMSSIALAAEDPVQSNAPRNNVLKYLDYVFTGVFTFEMVIKM
IDLGLLLHPGSYFRDLWNILDFIVVSGALVAFACSGTKGKDINTIKSLRVLRVLRPLKTI
KRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDESKGLEKDC
RGQFLDYDKVERGRDVEAQPREWKKYEFHYDNVLWAFLTLFTVSTGEGWPLVLKHSVDAT
YEDQGPSPGFRMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERA
CIDFAINAKPLTRYMPENKQSFQYKMWKFVVSPPFEYAIMTLIALNTVVLMMKFYGAPDL
YESMLKYLNIVFTALFTLECILKLIAFGPLNYLKAAWNVFDFVTVLGSITDILVTEIKDK
MINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQV
FGNIELNEETAINHHNNFQTFFQALTLLFRSATGEAWHEIMLSCLSNRSCDQLSGNIGKE
CGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFIRVWAEYDP
AACGRMNYRDMYEMLRDMSPPLGLGKKCPPRIAYKRLVRMNMPIADDNTVHFTSTLMALI
RTALEIKLASGVLAQHLCDIDLKRELNRVWPSLSQKTVDLLVTPHKYNELTVGKVYAALM
IFDYYKQNRAKRLQQQNPSGGVQSKLGALFRPILPLGHIKEVEQPIPSPKQLLPLHPESD
SKTSPLLPVTTTATTSVQKDTVLDQKSSIKHSQSGDVCQAALRPKGRRKLQRGQSEDMQC
SIRPQEVVEMKPVENISDTETYPGLEGHSRAASLPRLNTEYYRSHPRHAPGTHLAPIVDL
SPIRRSASSLTPHHHQEVVLRDYNLTQPGQHQSSAGSGPVQGQDRVHHHHHHHRCHRRRD
KDKEKKQKFLDRTTSVQAPTTVGSFTDPSAEGMSRERARERDRSRPHERRHHSSAGEKQR
YYSCERYGSRETNHAKSAGPSRSTSPGEGQDTAVPRQHGSTGYKPTPSGSSTPGRGRRQL
PQTPLTPRPAVAYKTANSSPLSSAASTTIAGQHTRVSCGLSEHERLHGDNDRSPIPVTCI
GSDPNLDQQLQGTSQQPFIEETEDFQDAVSSQVLSHTARAGASATTSSSHGTAAASVPVT
AAATQGGADVVPNGYHFTFGVSATSNSRGTGSLREREDEDWC
NT seq
7149 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtttcactgaagaccaccccacccgctacggagggggcactggcggcagcagc
agtggagggcgaggagcgccgggtgccgggagaggaggcgcccgcggtggaggcgctcct
ggcggccagaggatgtacaagcagacgatggcccagagagcccggacaatggctctttac
aaccccaaccccgtcaagcaaaactgcttgactgtgaatcgctccctgttcatcttccga
gaggacaacctgatcaggaagtatgccaaacgtatcacagaatggcctccctttgaatac
atgatcctggctacaatcatcgccaactgcatcgtcttggccctggagcaacatctgccg
gccagtgacaagacgcccatgtcagagcgcctggacgacacagagccctactttattgga
atattctgttttgaggcagccattaagatcatcgccctgggctttgcgttccacaaaggc
tcctacctccgtaacggatggaacgtaatggacttcgtggtcgttctcaccgggatcctg
gcaaaagtgggctccgactttgacctacgaacactgcgggctgtcagagtgctgcgcccc
ctcaaactagtgtcagggatccccagcctccaagtggtgttgaagtccataatgaaagcc
atggtgcccctgcttcagatcggcttgctgcttttctttgccattgtcatgtttgccatc
attggggtggagttttacatgggcaaattccacaccacctgcttcaacactgacaccggt
gaaaaagcagctgaatggccttgtggtctggagcccccagccaggttgtgtccaaatggg
acccagtgcaaagaatattggactggacccaattttggtataacaaacttcgacaacatc
ctatttgccgtgcttacggtattccagtgcatcactatggagggctgggtggacatcctc
tacagcaccaacgatgtagcaggaaacacatggaattggctctacttcatacctctcatt
atcattggctctttcttcatgcttaacttggtgcttggtgtcctgtcaggagagtttgct
aaagagagagaacgtgtggagaagagacaagagttcctgaagcttcggcggcagcaacaa
attgaaagagagctcaccggatacctagaatggatctgcaaagctgaggaagtgttgctg
gaagaggaagatgagattgcagaggagaagtcaccgctggatggtgcgtggtacaagagg
aaacaaaatctgccagtcctgaaacgaagtaaaaacaagaagggtaaaaatgacctgatc
agtgctgaggaaggggatgatccatttgttgacatctcctctgttgctcctcccggttct
ccttttggtcgggccagtgtgaaaagcagcactaagatggacagctcttcttactttcgt
cgtaaggaaaagaggatccgtttcttcatccggcggatggtaaaagcgcagagcttctat
tggatcgttctgtgtctggtgggtctgaacactctgtgtgtggctatagtccactatgat
caacccgagtggcttacaacggctctatacacagctgaatttgtattcctgggtttgttt
ctcacggagatgaccttgaagatgtatggccttggaccaaggaactatttccactcgtcc
tttaactgctttgattttggggtgattgtgggaagtatttttgaggttatctgggatatg
atcaaacccggagcatcatttggtataagtgtgctgagagccctaagactgctaaggatc
ttcaaagtcactaagtactggaactccctgaggaaccttgtggtttccctacttaattcc
atgaagtcaatcatcagtttgcttttcctcctcttcctgttcatcgttgtcttcgctctg
ctgggcatgcagctctttggaggacaatttaattttgaggatgaaacaccgacaacaaac
ttcgatacctttccagcagccattctcactgtgtttcagattttaacgggggaggactgg
aatgctgtgatgtaccatggcatagagtcacaaggcggtgtccgccgtgggatgttctct
tctgtctacttcattgtccttacactttttggaaattacaccctactgaatgttttcttg
gctatcgctgttgataatcttgcaaatgcgcaggagctaactaaggatgaagaagaacag
gaggaggcagccaataagaagcttgctctgcagaaagcgttggaggtgaaggaagtcagt
cccatgtcagcagccaacatctcaatagctgcttttgtaaagcaaaatcgagacgcactc
tctcgcaggtcgtccatcaacagcattcagtcactcaaggaacaacaacgggcagccaaa
accatgtcagtatgggagcagagaaccaaccaactgaggagacacaacatgagagcgagc
agcgaggctttgtttaacgagcttgatccagaggagcgcctacgactctcgtctgttctc
catctccatcctgacatgaagactcacctggacaggccccttgttgtggagtccaggaac
agcgacgatcctaacagacttcctgaggaaggacagcaagacagcacgggagacaacttc
cattcacacaccaggaaacaccaccgccatcgggacaggaacggcgagggcagggacgga
ggtgatggccgtgcaacgaggcatcacacccatcacagccggagcaaagatcacaatagc
aacggggctcagagtaaagagaggagaggggaaagtagccacagtcgagatgaggggcag
agacgcaggcggcatcatcacacaggctctcctgaagaggagatctctgatgtccgagga
ggaggtgaagaaagaggccatcgccatcaccactcacatcgtacaccaaaagagggaaat
gggacattagcgaatggtgcccacggagatcgtagggtccgggaaagaggaggggatggt
aatggagaaagaaaagcacgttgctctagaatggtcagagcccagtcaactctggatgaa
aatgaaagcaaaacgtgcaagaaaggtcatagggagatgcagtctgatggtgaggaagag
ggtcttgccaccagtcaactcagtcttggagacaagcaagaggacgctgacaaccaaaag
aactccacaagagccagccaggccggccttaacagcaacaccattcacatccctgtaacc
ataactgccccacctggagagaccaccattattcccatgaacaacattgattccggcaac
ttcagagtgaatgaggaaaagaaagctctggaagaggatgatgctgtcagtaggcctcgg
caaatcctcccctatagttccatgttcatctttggacaaacaaacccggtgcggcggcta
tgtcactacgtggtcaacctacgctactttgaaatgtgcatcctgatggtcattaccatg
agcagcattgccctggcagccgaggaccccgttcagtccaatgcaccgcgtaacaacgtc
ctcaagtatctggattatgtcttcactggagtgtttacttttgagatggtgataaagatg
attgacttaggactgctcctccatcctggctcctattttcgtgacctatggaacattctt
gacttcattgtggtcagtggcgctcttgtggcgttcgcctgctcagggacaaaaggaaag
gacatcaacaccattaagtccctgagggtcctcagagtcttgcggccgctcaaaaccatt
aaacgtctgcccaaactcaaggctgtgtttgactgtgttgtgaattccctgaagaatgtt
ctcaacatcctcatcgtctacatcctctttatgttcatctttgcggtgatagctgtgcag
ctttttaaaggcaaattcttttactgtactgatgagtccaaaggtctcgagaaagactgc
aggggtcaatttctggactatgacaaagtggaacgtggacgcgacgttgaagctcagccc
agagagtggaagaaatatgaattccactacgataatgttctttgggccttcttaacgctt
ttcactgtttccactggagagggctggcctcttgttctgaaacactcagtggatgccacg
tatgaggaccagggccccagtccaggcttccgcatggagacatccatcttctatgtggtg
tactttgtggtgttccctttcttctttgtcaacatatttgtggctttgattatcatcacc
ttccaggagcagggagacaaagccatgtctgagtgtagcctggaaaaaaatgagagggct
tgcattgacttcgccataaatgccaagccgctgacaagatacatgccagagaacaaacaa
tccttccagtataagatgtggaaatttgtggtgtcgcctccattcgaatatgctattatg
actctaattgccctcaacactgtggtgttgatgatgaagttttatggagcaccagaccta
tacgagtccatgctgaaatacttgaacatcgtcttcactgcgctcttcactctggagtgc
atccttaagcttattgcctttggtccactgaattacctgaaagcagcctggaatgtattt
gattttgtgacggtgctgggaagcataacagacatcctggtgacagagattaaggacaag
atgattaacctgagcttccttaggctgttcagagcggctcgactcatcaaactgctacga
cagggctacaccattcgcattttgttgtggacattcgttcaatctttcaaggccctacca
tatgtttgcctgctaattgcaatgctgttcttcatctatgccattattggaatgcaggta
tttggtaatatcgagctgaatgaggagactgcaataaatcaccacaacaacttccagacc
tttttccaggctttaactcttctcttcaggagtgccacaggtgaagcatggcatgagatc
atgctatcatgcctcagtaaccggtcatgtgaccaactttcaggaaacatagggaaggag
tgcggaagtgactttgcatacttctactttgtctcctttattttcctctgctccttcttg
atgctaaatctatttgttgctgtcatcatggacaactttgagtatctaaccagggacgcc
tccatcttgggtcctcatcaccttgatgagttcatccgtgtatgggcagagtatgaccct
gctgcatgtggccgtatgaattatcgcgatatgtacgagatgcttcgagacatgtcccct
cctctaggtttgggaaagaaatgcccaccccgcatcgcctacaagcgtttggtcaggatg
aacatgcctattgctgatgacaacacagtgcatttcacctccacgctaatggccctgatt
cgcacagccttggagatcaagctggcatctggagtcttagcccaacatttatgtgatatt
gacctgaaaagagaattaaacagagtttggcccagcttgtcgcagaagactgttgacctg
ttggtgacaccacataaatacaatgagctgaccgtggggaaagtgtatgcagctctcatg
atctttgactactataagcagaatcgtgccaagagactccagcagcaaaatccttcagga
ggggtgcagagtaaactgggggctttgtttcgtcctattcttccccttggtcacatcaag
gaagtagagcaaccgataccaagtcccaaacagctcttgcctttacacccagagtcagac
tcaaaaacatcacctcttctccctgtcacaaccactgccaccacctcagtacagaaggac
acagttcttgaccagaagagttccataaaacattcccaatctggagatgtttgtcaggca
gcgctgagacccaaagggcgcaggaaactacagaggggccagtcagaagatatgcagtgt
tccataaggcctcaggaagtagttgaaatgaagccagttgaaaacatctcagacacagag
acataccctggcctggaaggccacagtagagcagcttctttacctcgactcaatacagag
tactatcggagccaccctcgccacgcccctgggacccacctggcaccgattgttgacctc
agtcccataagacgctccgcttcctcgctgaccccacaccaccaccaggaggttgtacta
agagactataacctgacacaaccagggcaacatcaatcatcagcagggtctggaccagtc
caaggccaggaccgcgtccatcaccatcatcaccaccaccgctgccacagacgcagggac
aaggacaaagagaaaaagcagaaattcctggatagaactacatcagtgcaggctccaact
actgttggttcattcacagacccctcagctgaaggcatgtcgagggaacgagccagggag
cgtgatcgcagtcgcccacacgagagaaggcatcactcttctgcaggggagaaacaacgc
tactactcctgtgagcgttatggctccagggagacaaaccatgccaagtcagccggtcca
agccgatccacctctccaggagagggacaagacactgctgtccctagacaacatggtagc
actgggtataaacccaccccctctggttcaagcacaccaggtcgtggtcgcaggcagctt
ccccaaacacccctgactcctcgtcctgctgtggcctacaagactgcaaactcctcccct
ctttcttctgctgccagcaccactatagccggacagcacactcgtgtcagctgtggcctt
tcagaacacgagcgcttgcatggggacaatgaccgctccccgataccggtcacctgcatt
ggttcagacccaaatttagaccagcagctgcagggaacttctcaacaaccgtttattgaa
gagacagaggacttccaggatgctgttagcagccaagtattgtctcacactgcccgtgcc
ggtgcctccgcaaccacctcatcttcccatggtactgctgctgcttctgtacccgtcacg
gcagcagccacacaagggggtgcagatgtggtacctaacgggtaccacttcacctttggg
gtaagcgctacatcaaacagcagaggaacaggaagcctcagggagagagaggatgaggac
tggtgctaa
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