Syngnathoides biaculeatus (alligator pipefish): 133515249
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Entry
133515249 CDS
T09681
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133515249 (chd1)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133515249 (chd1)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
133515249 (chd1)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
133515249 (chd1)
SLIK complex
133515249 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
133515249
NCBI-ProteinID:
XP_061703585
LinkDB
All DBs
Position
17:2240816..2338753
Genome browser
AA seq
1788 aa
AA seq
DB search
MAQRNENESVSNSSGESSNSDDESGSGSASGSGSGSSSSSSSSSSQSGSSDSGSGSDSGS
QSESENEKSKEKIDPPNKSNIVGAEFWKSNPSILAVQRSALLRKQQLQQQQQRQSSSNSG
SDEDSSSSDESDSSTGSKRRRNSGSSDSGSDSGSGSGSRSDSSAENNSDETASDYEPSQP
TKSRKPPTKMKFRNGKKSSSQKTKAQKCSSSEDEDNYKKVVAPGPRRQATVNISYKEDEE
LKTDSDDLVEVLGEDVPQPEEDEFETLERVMDSRIGRKRAVGSVTTVYAVEADGDPNAYF
NSNKEAGEIQYLIKWKNWAHIHNTWETEETLKFQNVRGMKKLENFKKKDQEKKKWLKAAS
PEDIEYFNCQEELIDDLHAQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWEDGA
LIANKFQKCIDDYMSRNQSKTIPSRDCKVLKQRPRFSPMKKQPHYISDGLELRDYQLDSL
NWMAHSWCKGNSCILADEMGLGKTIQTISFLNYLFNEHQLYGPFLLVVPLSTLTSWQREI
QLWAPQMNVVVYLGDISSRNMIRTHEWMHVHSKRLKFNILLTTYEILLKDKSFLGSVNWS
FIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFHSWE
MFEEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQYYKWI
LTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEDHEFLNRAEALQQLIRSSGK
LILLDKLLVRLKERGHRVLIFSQMVRMLDILADYLRSRQFLFQRLDGSIKGEMRKQALDH
FNADASEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKRQVNI
YRLVTKGSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGTAPSSSAPFNKEELSAIL
KFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFTMMEE
EEIDIDSERSQRSWDDIIPQEQRRRMEEEERQKELEEIYMLPRMRNCAKQMSFNVNEGRR
QGRNRRYSGSDSDSHSDRKRPKKRGRPRTIPRENIKGFSDAEIRRFVKSYKKFGGPLERL
DAIARDAELVDKSEHDLKRLAETVHNGCVRTLRENPCGPEKSSGGRRGKVKGPTFRISGV
QVNAKLVISHEEELAPLHKAIPADPEERKKYIIPCHSKAAHFDLEWGKEDDSSLLIGIYE
YGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKREAQKQAG
TANSRKRRPRSKKRDNLKSTPIDEMNKSASSDPPSEKRSEDELEEEKEEVPVKATSRRSR
TDREILKEETQEEEDDDEEEEAQQDDGSSSGETENKEEIKKECKQEKKEDSWDSKETKEP
KEKKEIKPLEAFEKKEVSVERTESKTEVRERIKKTSDIPVHITATGENIPVSEESEELDQ
KTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYSNPDLI
KQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQENTQAMEQNTRSINTMGFKHADMERV
RDNSHQDDSSRDSYSSDRHQSSARCHDSSKERHTSELYKKTLGDSRKRPYSSFSNGKDHR
DHYRPDSRDRDRQDRHHSDAKQRKLEDLRSGRDHWLDLKDLSHSDQRSSYRYQSDWQAEQ
RASASGPRSPRDQRSPYESRSPLGHCSPFDYSSDHKSTPEQIWTTRKT
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atggcccaacgcaatgagaatgaaagtgtcagcaacagcagtggcgaatcaagcaattct
gatgatgaatcaggttctggatcagcatctggatctggctcaggttccagttcaagctct
tctagcagtagcagtcagtcaggaagcagcgactcaggaagtggctcagactctggcagc
cagtcagagtcagagaatgagaaatccaaggaaaagattgaccctccaaataagtcaaac
attgttggcgctgagttttggaagtccaacccaagtatcctggcagtccaacgatctgct
ctactcaggaaacagcagcttcaacagcaacagcagaggcaaagctcctcgaacagtgga
tctgatgaggactcatcaagtagcgatgagtcagactcatcaactggatcgaaaaggaga
agaaattctggctcctctgactctggatcagattctggatcaggaagtggatctcgatca
gactcatctgccgagaacaacagtgatgaaactgcttcagattatgagcccagtcaacca
accaaaagtagaaagcctccaactaagatgaaatttcgtaatggtaagaagagcagctcg
cagaaaacgaaagcccaaaaatgttcatcttctgaggatgaggataactataagaaggtt
gtcgctcctggtccacggcgtcaggctactgtcaacattagctacaaggaagacgaggag
ctgaaaactgattcagatgaccttgtggaagttcttggtgaagatgtccctcaacctgag
gaagatgagtttgaaacactggagagagtgatggatagcagaattggaaggaaaagggct
gtgggaagtgtgaccacggtatatgctgtagaagcggatggagaccccaatgcgtacttt
aattctaataaggaggcaggggaaatccagtacctcataaagtggaaaaactgggcccac
attcacaacacttgggaaacagaagaaacccttaaatttcagaatgttaggggtatgaag
aaactggaaaattttaagaagaaggatcaggagaaaaagaaatggttaaaggcagcctca
cctgaggatattgagtatttcaattgccaggaagaactcattgatgacctgcacgctcag
tatcaacttgtggagaggatcataggtcattctaaccaaaaatcagctgctggttaccca
gactacctgtgcaagtggcagggattgccatactctgaatgtagctgggaagatggagct
ctgattgcaaataagttccagaaatgtattgatgattacatgagcagaaaccaatcaaag
accattccatccagagattgcaaggtgctaaaacagagaccaaggttttctccaatgaaa
aagcagccgcattacataagtgatggactagagctcagagactatcagctggacagtttg
aactggatggcccactcgtggtgcaaaggcaacagctgcatccttgcagatgagatgggt
ttagggaagactatccaaaccatctctttcctcaactatttgtttaatgagcaccagctt
tatggccccttcttgctagttgtacctctctctacattaacatcctggcagagggaaatc
cagctctgggcccctcagatgaatgttgttgtctacctgggggacataagcagtaggaat
atgatcagaacacatgagtggatgcatgttcattccaagaggctgaaattcaacatcctt
ctcaccacatatgaaattcttctcaaggacaagtcttttttgggcagtgttaactggtct
ttcattggtgtggatgaagcacatcgactgaagaatgatgactcgctcctctacaagact
atgattgacttcaagtccaatcacaggctcctcatcactggaacaccgctgcaaaactcc
ctcaaagagctctggtcgttgctgcatttcattatgcctgaaaagtttcactcttgggag
atgtttgaagaggaacatgggaaaggacgggattctggctacaccagtctgcacaaagaa
ctggaaccttttcttctacgcagagtcaagaaggatgtggagaaatctcttcctgccaaa
gtggagcagatcctccgagtagaaatgagtgctatccagaaacagtattacaaatggatc
ctgacaaggaactacaaggctctgagtaaaggtaccaaaggcagcacatcaggtttcctc
aacatcatgatggagttgaagaagtgttgtaaccactgttatctgatcaaaccgcccgag
gatcatgaattcttgaacagagctgaagcattacagcaacttatccgcagcagtgggaag
ctgattttattggacaagttgctggttcgtctgaaagagcgaggccacagagtactaatc
ttctcccagatggttcggatgctggatatccttgccgattacctaagaagtcgacagttc
ctttttcagagattagatggctccatcaagggggagatgaggaagcaggcattagatcat
tttaatgctgatgcgtcagaggatttctgtttcctgttgtccacacgtgctggtggcctt
ggtatcaatctggcttcagctgacacagttgtcatctttgactctgactggaacccccaa
aatgatcttcaagcccaggccagagcccacaggattggacagaagagacaagtaaacatc
tatcgattggtgacaaaaggttcagtggaagaggaaataattgaaagagcaaagaagaag
atggtgctggatcaccttgtcattcagagaatggacacaacaggaaaaacagtcctccac
actggcacagctccctctagttcagcaccattcaacaaggaagagttgtccgcaatcctt
aaatttggtgcagaggagctattcaaagagccagagggtgaagagcaggagccccaggaa
atggatattgatgagattctcaaaagagctgagacaagagagaatgatcctggaccttcc
acggtgggagaagaacttctgtctcaattcaaggttgcaaacttcacgatgatggaggaa
gaggaaatagacatagactcagagcgtagccagcgcagttgggatgacatcattcctcag
gagcagaggaggaggatggaggaggaagagagacagaaggagcttgaagaaatctacatg
ctgccgcgtatgaggaattgtgccaaacagatgagctttaatgttaatgagggcagaaga
cagggcaggaacaggagatactcagggtccgacagtgactcccactcagatcgaaagagg
cccaagaaacgaggtcggcctcggaccattccgcgggaaaatatcaagggcttcagtgac
gccgagatccggaggtttgtcaaaagttacaagaaatttggaggaccattggaacggttg
gatgctattgctcgtgatgccgaacttgtggataagtctgaacatgacctgaaacgcttg
gctgaaacagttcacaacggttgtgtgagaacgttacgagaaaatccctgtggcccagag
aaaagttctggaggaagaagagggaaagtaaaagggcccacattcaggatctctggtgta
caagtcaacgctaagctcgttatttctcatgaggaagagctagctccacttcacaaggca
atccctgcagatcccgaggagagaaaaaagtatattattccatgccactcaaaggcagca
cactttgaccttgagtgggggaaagaggatgactctagtttgctaataggaatctacgaa
tatggttacggcagctgggagatgataaaaatggacccagacctcaatctcacacacaag
ctcctaccagatgaccctgataagaaaccgcaggccaaacagctacagaccagagcagac
tacctcatcaagttactgagcaaggaccttgccaaaagagaagctcagaaacaagcaggc
acagctaattctcgaaagaggaggccaagaagcaaaaaaagagataatctgaagtcaact
ccaatagatgagatgaataagagtgcatcgtcagatcctccatcagagaaaaggtctgag
gatgaattggaagaggaaaaggaggaggtgccagtgaaggctacaagcagacgaagcaga
acagacagagagatattgaaggaagagactcaggaggaggaagatgatgatgaggaggag
gaggcgcaacaggatgatggctcttcatccggtgagacggagaacaaagaggaaataaag
aaagaatgcaaacaggagaaaaaggaagacagttgggacagtaaagaaacaaaggagcca
aaagagaaaaaagaaatcaagcctttggaagcgttcgagaaaaaagaggtcagtgttgaa
aggacggaaagcaaaaccgaggtcagagaacggataaagaaaacatccgatattccagtc
catataacagcaactggagagaatattccagtgtctgaggagtctgaagaattagaccag
aaaacctttagtgtgtgtaaagaaaggatgcggcctgtgaaagccgccctgaaacagctg
gaccggccggagaagggactttctgagcgagagcagctcgagcataccaggcaatgtctc
atcaagattggagaccacatcactgagtgtctgaaggaatattccaatcctgacctcatt
aagcagtggagaaaaaacctgtggatatttgtctctaaattcactgaatttgatgccagg
aaattgcataagttatataaacatgccatcaagaaaagacaagagaacactcaggcaatg
gagcagaacactaggagtataaacacaatgggttttaaacatgcagatatggaacgggtg
agggacaactctcaccaggatgacagcagcagggacagttatagctcagacagacatcag
tcctcagctcgttgccatgacagcagcaaggagagacacacttctgagctttacaagaag
actctgggcgattccagaaaaaggccctactcctcatttagcaatggcaaagaccacaga
gaccactaccgaccagacagcagggatcgagatagacaggacagacatcacagcgatgcg
aagcaaaggaagctggaggatttgcgctctggtagagaccactggctggacttgaaggat
ctctctcactcagaccagcgctcgtcttaccggtaccagtcagactggcaggcggagcag
agggcctctgccagcgggccccgctccccccgagaccagcgctcaccttatgaatcgcgc
tcaccgctgggtcattgctctccttttgactattcctctgaccacaagagcacaccggag
cagatctggaccacccgtaagacataa
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integrated database retrieval system
