KEGG   Syngnathoides biaculeatus (alligator pipefish): 133515256
Entry
133515256         CDS       T09681                                 
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    133515256
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sbia04131]
    133515256
Membrane trafficking [BR:sbia04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    133515256
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 WD40 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_Gbeta WDR55 EIF3I Beta-prop_EML ASA1 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd CFAP251_N Beta-prop_NOL10_N Beta-prop_ACSF4 Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_Aladin Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_DCAF12 PAC11 WDR72_alpha-sol WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_DCAF4 Tricorn_2nd PD40
Other DBs
NCBI-GeneID: 133515256
NCBI-ProteinID: XP_061703604
LinkDB
Position
17:7532529..7692287
AA seq 1448 aa
MSGNNLVLPIVLWGRTAPTHCISSLLVMDDFSTIITGCHDGQICLWDMTSELQICPRAML
FGHTASITCLSKASACSDTQYIVSASESGEMCLWDVNDGRCIEFTKLACAHTCIQFYQFT
IGTQREGRLLCIGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAV
SVTGILKVWMITAEVNRMQELDPVFEEESKPIYCQGCQSISFCTFTQSSLLVVCSKFWRV
FDAGDYSLLCSVPSDNDRAWAGGEFIAADKVILWTEDGCSYIYNLPASCLPASVHFRSDV
GKKEGSVPPLIYSIENVTDKQLLICPPVTRFFFGRREPFSKLLIQGDSAGRLSLWSMPDS
SPPSPLSTPTELQLSSTISLQEAFDKLIPVSSGIIDQLSNLPSKEEPIKVTASVYIPSQG
RLVCGREDGSIILVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTSVLYPYQLSPR
YDQRSLVSGGVDFSVIVWDIFTGEMKHIFCVHGGEITQLIVPPENCSTRVQHCICSVASD
HSVGLLSLRERKCIMLASRHLFPIQIIKWRPADDYLVVGCSDGSVYVWQMDTGALDRCVM
GITAVEILNACDELAPATVDALGHSAVNLKQAMTRRSLAALKNMAQHKLQTLATNLLAAD
NADKGNLPKYSHNALVVQAMKTNLTDPDMHVLFFDVEAVIIQLLTEEAQRPNPMLVSPET
LQKSQAGADKGGSFLANKIFKQVKETMKETIKEHLLDEDEEEEEEMRRREEKSKSLSLLE
YNLTMDTAKLFMSCLHAWGLNEQLDGICLERLGMLRPHCPISFGLISRGGHMSLMLPTFK
ESLLRQLSLATGRKLTLSDIVGKGTYGVSRAVTTQHLLSVISLANTLMGMTNATFVGEHM
KKGPSRPPRPGGTPEIPRRTPGTPPQTSNPALQAQIKQGWSQLAAMHCVMLPDLLGLDKF
RPPLLEMLARRWQDRCLEVREAAQALLLAELRRIGQSGRKDTIDLWAPYLPQYVDTVSSP
GTSTEPSTPAQPPPEAQPLEVKAPEEEMDVTEDDITAGCLSNLPPNAKKISNSYEERRKQ
ATAIVLLGVIGAEFGAEIEPPKGAARTRAGGQVPEGFGPTSGGSSNYSLARHTCKALTFL
LLQPPSRKLPPHSTIRRTAIDLIGRGFTVWEAYMDVSAVLMGLLELCADAEKQLANVTMG
LPLNPPADSARSARHALSLIATARPPAFITTIAREVHRYNAAQANSQSQQNVHTTTLARA
KTEILRVIDILIEKMPGDVVDLLVEVMDIIMYCIEGSLVKKKGLQECFPAICKFYMVSYC
DRSHRIAVGARQGSVALYDVRTGKCQNIHGHKGPITAVSFAPDGRYLATYSNADSHISFW
QMNTSLLGSIGMLNSAPQLRCIKTYQVPPVQPASPGSQNHMKLARLIWTSNRNVILMAHD
GKEHRFMV
NT seq 4347 nt   +upstreamnt  +downstreamnt
atgtcagggaacaatctggttctacccattgttctctggggccgtacagctccgacccac
tgtatcagcagcctgttggtgatggacgacttcagcacaatcattactggctgccatgat
ggacaaatctgcctttgggatatgacatcggagctgcagatttgtcccagggccatgtta
tttggtcacacagcttctatcacctgtctgtctaaagccagcgcctgcagtgatacacaa
tacattgtcagcgcatcagagagtggggagatgtgtttatgggatgtaaatgatggtcgc
tgtattgaatttaccaaactggcttgcgctcacacttgcatacagttctatcagttcact
attggcactcagcgagaaggtcgtctgctctgtattggccattaccctgagattcttgtg
gtagatgccaccagtctggaggtgctatactcgctggtgtctaaaatctcccctgactgg
atcagttccatgagcattatccgatcacaccgcacacaagaggacacagttgtggcagtg
tctgtgacaggcattttaaaggtttggatgatcacagcagaggtcaacaggatgcaggaa
ctagaccccgtgtttgaagaggagtccaaaccaatctactgtcagggctgtcagagtatt
tcgttctgtaccttcactcagagcagcctgctggttgtctgctccaagttctggagggtt
tttgatgcaggtgactattcactgctctgctccgtgcccagtgacaatgacagggcctgg
gctgggggagagttcattgcagcagataaagtcatcctctggactgaagatggctgcagt
tacatctataacctaccagcgagttgtctacctgctagtgtacatttccgaagtgatgtg
ggcaaaaaagaaggttcagtaccaccattgatctacagcatcgaaaatgtaacagacaaa
cagctcctgatttgtccacctgtgactcggttcttctttgggcgacgggaacccttctct
aagttactgatccagggagactctgcaggccgactgtctctgtggagtatgccagactcc
tcacctccatccccactgtcaactccgacagagctgcagctctcatccaccatcagcctt
caagaggcctttgataaattgattcctgtgtcttctggtatcattgaccagctcagcaac
ctgcctagcaaagaggaacccatcaaggtgacggctagtgtctacattccctcccagggt
cgactcgtgtgtggaagagaagatggcagtattattttggttcctgctacacaaactgcc
attgttcagttgctacagggagaacacatgcttagaagaggatggccaccccaccgtaca
ctccgaggtcacaggaataaggtgacatctgtcctgtatccgtaccagttatctccccgc
tacgaccagcgctctttagtgtcaggaggggtggacttctctgtcattgtgtgggacatt
ttcactggtgagatgaagcacattttctgtgtccatggaggagagatcactcagctcatt
gtcccaccagaaaactgcagcactcgagtgcagcactgcatctgctctgttgccagcgac
cactcggttggcctgctcagtcttagggaaaggaagtgcatcatgcttgcatcacggcac
ctgtttccaatccaaatcatcaaatggcgccccgcagatgactacctcgttgttggatgc
tctgatggctccgtttatgtctggcagatggatacaggggctctggaccgctgtgtgatg
ggtataactgctgtagagatactcaatgcctgtgatgagttggctccggccaccgtggat
gccttgggccattcggcagtgaacctgaagcaggcaatgactcgccggagcctggcggca
ctaaagaatatggctcagcacaaactgcaaacacttgccaccaatctgctggcggcagac
aatgctgacaagggaaacctacccaaatactctcacaacgcactggtggtccaagcaatg
aagaccaacctcacggaccctgacatgcatgtcctattctttgacgtggaagcagtgatc
atccagttgctgacagaagaagctcagaggccaaatcccatgctggtgtcccctgagacg
cttcaaaaaagccaagctggggctgacaagggaggctctttcctggccaacaagattttc
aagcaggtaaaggaaactatgaaagagaccattaaggagcacctgctggatgaagatgag
gaagaggaggaggagatgagaaggcgtgaggagaaatcaaagtcactgagtcttctggag
tacaacctgacaatggacacagccaaactcttcatgtcctgtttgcatgcctggggcctg
aacgagcagctggatggtatctgtctcgagagactcggcatgctcaggcctcactgcccc
atctcttttggcttaatctccagaggaggtcacatgtccctcatgctgcccacctttaag
gagtctttgctgcggcagttgtcccttgcaacaggtcggaagctgacgttgtcagacatt
gttggcaaggggacatacggtgtgtcaagggcggtcactacacagcacctcctgtccgtt
atctctctggccaacactctgatgggcatgaccaatgccacctttgtgggtgagcacatg
aagaagggaccatccaggcctcccagaccaggaggaaccccggagattcctcgtaggacg
ccgggcacacctcctcagacctccaacccggcactacaagctcagatcaaacaaggttgg
agccagctggcagcaatgcactgcgtaatgctccctgaccttttgggtctggataagttt
agacctccactactagagatgctggctagaagatggcaggaccgctgtctggaggtgcgc
gaagcagcacaagctttactgttggctgagttgagaaggattggccaatcagggcgtaag
gacaccattgatttgtgggcaccttacctgcctcaatatgtagacacagtcagctcccct
ggcacatctactgaaccgtcaactccagcccagccccctcctgaagctcaaccacttgag
gtcaaggctcctgaagaggaaatggatgttaccgaggacgacatcactgcaggctgcctc
tcaaaccttccaccaaatgccaaaaagatctccaattcatatgaggagcgccggaaacag
gccaccgccattgtcctgctgggtgtcatcggggccgagtttggggccgagattgaacct
ccaaaaggtgcagcacgtactcgagccggtggacaggtccctgaaggctttggaccaaca
agtggcggttcctcaaactattccctagcaagacacacatgtaaagcattgaccttcctg
ttgctccagcctcctagccgaaagctgccaccacacagcacaatccgccgcactgctatc
gatctgatcggccgaggcttcaccgtgtgggaggcatacatggacgtgtccgcagtgctc
atgggattgctggagctctgcgccgatgcagagaagcagctagccaatgttaccatgggt
ttgccgcttaacccaccagcagattcggctcgctcagcccgacacgccctctctcttatc
gcaactgcccggccgcctgctttcatcaccaccattgcaagagaggtccaccggtacaat
gcagcccaggctaactctcaatcacagcagaatgttcacaccaccactttggctcgagcc
aagactgaaatattgagagtgattgatatcctgatcgagaagatgcctggagatgttgta
gacttacttgttgaggtgatggatataatcatgtactgtattgaaggttctctggtgaag
aagaagggcctacaagagtgttttcctgctatttgcaagttctacatggtgagttactgc
gaccgcagtcatcgaattgctgttggagctcgtcaaggttcagtggctctctacgatgtt
cgcactggaaaatgccagaatatccatggtcataagggtccaatcacagcggtgtcattt
gcccctgatgggcgttacctggcaacatactccaacgctgacagtcacatctctttctgg
caaatgaacaccagtcttctgggtagcattgggatgttgaactcggccccccagcttcgc
tgcattaagacttaccaggtgccgccggtccagccggcatctcccggctcccaaaatcac
atgaagctcgcccgcctgatctggacttccaaccggaacgtcatcctgatggcacatgat
ggcaaggagcaccgcttcatggtttaa

DBGET integrated database retrieval system