Syngnathoides biaculeatus (alligator pipefish): 133515276
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Entry
133515276 CDS
T09681
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133515276 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133515276 (exosc2)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
133515276 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
133515276 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
Motif
Other DBs
NCBI-GeneID:
133515276
NCBI-ProteinID:
XP_061703658
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All DBs
Position
17:complement(18907853..18913349)
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AA seq
313 aa
AA seq
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MSCLQLLAGKCQRRRTAKSSMAADMRLPAIRKLESPSLSTGDRRDLVVPGDVITSDSGFM
RGHGTYVDEEKLTASVAGEVQRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVET
NSRLDSVLLLSSVNLPGGELRRRSAEDELTMREYLLEGDLISAEVQSVFSDGALSLHTRS
LKYGKLGQGVLVQLSPSLIKRQKTHFHNLPCGASIILGNNGFVWLYPTPGQQEEEAGGFY
TSLEPVGLSDREVISRLRNCLLALAAHKVLLFDTSVLYCYESSLQHQVKDILKPEVMEEI
VMLTQQKLIEQEG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgtctgcaactgttagcaggaaaatgtcaaagaagaagaacagcaaaaagcagc
atggcggctgacatgagattaccagccattagaaaactagaatctccttctctttccact
ggagacagaagagatttggtcgtgcccggcgatgtgatcacgtctgactcgggtttcatg
aggggtcatggtacttatgtggatgaggagaaactgactgcttccgtggctggagaagtg
cagcgagtggacaaactcatttgcgtgagacctctcaagactaggttcaacggggaggtt
ggcgatgtcgtcgttggcagaatcacagaggtgcaacaaaaacgatggaaggtggagaca
aactcccgactggactccgtccttttgttatcttctgtcaacctgcctggaggagagctg
aggagaagatcggcagaagacgagctcaccatgagagaatatctactcgagggagacctc
atcagtgcagaggtgcagtctgtcttctccgacggggccttgtcacttcacactcgtagc
ttaaagtatgggaaactcggccagggggtgctcgtccagctctcgccgtctctcatcaaa
agacaaaaaacgcatttccacaacctgccgtgcggcgcctccatcatccttggcaacaac
ggctttgtgtggctttatcccacaccgggacagcaggaagaggaggccgggggcttctac
accagcctcgagcctgtcggcctgtcggatcgcgaggtgatttcccggttaaggaactgc
ctgctggctctggcggcgcacaaggttctcctgttcgacaccagcgttctctactgctat
gaatcttcactgcaacaccaggttaaagacattctgaaaccagaagtgatggaggagatt
gtgatgctgacacaacagaagcttattgaacaggaaggttaa
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integrated database retrieval system
