Syngnathoides biaculeatus (alligator pipefish): 133515294
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Entry
133515294 CDS
T09681
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04510
Focal adhesion
sbia04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133515294 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
133515294 (rapgef1b)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
133515294
NCBI-ProteinID:
XP_061703689
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Position
17:complement(22475438..22526586)
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AA seq
1133 aa
AA seq
DB search
MSGKIESKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKQLQPEPAAKSTEKPANKKV
SRLEEHEKEVVSALRYFKTIVDKMVVEKKVLEMLPGSASKVLEAILPLVQGEARIQHSSA
LSSCHNRVYQSLANLIRWADQVMLDGIDLDDKENVTSVTNVIKAVLDGVKELVKLTIEKQ
EQPSPTSPNKPAPPVNTAESSSVPCEVASIERDSEAPKTTASGAAPPEAPSGLLTDEDVA
PPKPPLPEAKMAELSPPPALPPKKRQSAPSPTRVAVVAPMSRGSSLPCSVHRQQHDYEQQ
FLQRRFSGGSQSYGGDSPRLSPSSSMGKLSKSDEQLSSMEQDSGQCSRNTSCETLDNTEN
YDPDYDFLHQDLSVGDNLPPIPVGGCLSPLPESHSESSSPVPGQHPSHPRFSAPPPQQPP
EYWTPQPGHPNPLSRISAPPALPQKKRRSTQTPPFPDGGSKLYERYPSQYDNLSEEEPPP
FPLFTPISPMPQTNGGAFVAQYICGENADVPASPPPLPEKKSRHILQYMQFVEDYSEPQP
SVFYQMPQSESIYEQRNKRFQEVYGFNDSFSSTDSVHEPLLPPALPPKQRQLASHSSSPS
SSSSSSLSCHLQPCAAAATEEAGSGLGLSMSVSNSCLIGQAALTTPTSESANDEGGEGEY
VNLYSSSRANGELPLGLRESIADGMLQDPAPPVPSTNSKEAMEVERRQKSAELAEDSEQD
VDELSLIDHKEIMSRITRKQENDDGPDVRAGSGDILLVHATETDRKDLVLYCEAFLTTYR
TFISPEDLIKKLHYRYTSFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTEDILKQLMD
LVFTLVCNGELSLARVLRKNILDKVEQKKLLRYTNSLKPLAARGVSARPGTLHDFRSHEI
ADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSLIIQQEKAQ
DREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSS
SSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIDGKVNFSKRWQQFNILDSMRR
FQQVHYELKRNDDIVSFFNDFSDHLAEEALWELSLKIKPRNIARRKTERDEKT
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcaagatcgagagcaagcaagactcacagcggtcccatctgtcctcatttacc
atgaagctgatggacaagttccattctcccaagatcaagaggacgccgtccaagaaaggc
aagcaactgcagcccgagcctgcggccaaaagcaccgagaagcccgctaacaagaaggtg
agccgactggaggagcacgagaaggaggtggtcagcgcccttcgctacttcaagaccatc
gtggacaagatggtggtggagaagaaggtgctggagatgctccccggctcggccagcaaa
gtcctggaggccatcctgcctctggttcagggggaggcccgcatacagcacagttcggcg
ttgtcctcctgccacaaccgcgtctaccagagtctcgccaacctcatccgctgggccgac
caggtgatgctggacggcatcgacctggacgacaaagagaacgtgacgtcggtcaccaac
gtcatcaaggcggtgctggacggcgtgaaggagttggtgaagctgaccatcgagaaacag
gagcagccgtcgcccaccagccccaacaaaccggcgccgcccgtaaatacggccgagagc
agcagcgttccctgcgaggtggcctcgatagagcgggattcggaagcgccgaagacgacg
gcctcgggggcggctcctcctgaggccccctcgggcctcctgaccgacgaggacgtcgcc
cctccgaagcccccgcttcccgaagccaagatggccgagctcagccctccgccggccctc
ccgccaaagaaacggcagtccgccccgtcgccgacccgcgtggccgtggtcgcccccatg
agccgggggtccagcttgccctgcagcgtccacagacagcagcacgactacgagcagcag
ttcctccagcggcgcttctcggggggcagccagtcgtacgggggggactccccgcgtctg
tcgcccagcagcagcatgggcaagctcagcaagtcggacgagcagctttcctccatggag
caagacagcggtcagtgttcccgcaacaccagctgcgagaccctcgacaacaccgaaaac
tacgaccccgactacgacttcctccaccaggacctgtccgttggggacaacctgccccca
atcccggtggggggttgcctcagcccgctgcccgagtcccacagcgagtcgtcctcgccg
gtccccgggcagcatccgtcgcacccccgcttcagcgcgccccccccccagcagccgccc
gagtactggacgccgcagccgggccaccccaaccccctgtcacgcatcagcgcgccgccc
gcgctcccccagaagaagcggcgcagcacgcagacgccccccttccccgacggcggctcc
aagttgtacgagcgctacccctcccagtacgacaacctgtccgaggaggagccgccgccc
ttcccgcttttcacgcccatctcgcccatgccgcagacgaacggcggcgcgttcgtcgcg
cagtacatttgcggcgagaacgcggacgtgcccgccagcccgccgccgctgccagaaaag
aaaagcagacacatcctgcagtacatgcagtttgtggaggactactcggagccgcagccg
tccgtcttctaccagatgccgcagagcgagagcatctacgagcagcgcaacaaacgcttc
caggaggtctacggcttcaacgactccttcagcagcaccgactcggtccacgagccgcta
ctgccgcccgcgctgccgcccaagcaacgacagctggcctcccactcctcctccccctct
tcctcctcctcttcctccctctcctgccacctccagccgtgtgcggcggcggccacggag
gaggcgggctctgggctgggcctcagcatgtccgtctctaactcctgcctgattggccag
gccgccttgaccacgcccacgagcgagagcgcaaatgacgagggcggggagggcgagtac
gtcaacttgtactcgtccagccgggccaatggcgagctgcctctcggcctcagagaaagc
atcgccgatggaatgctgcaagaccccgcccctcccgtgccgtccaccaatagcaaagag
gcgatggaagtggaaaggcggcaaaagtctgcagagttagcggaggacagcgagcaggac
gttgacgagctttccctcatcgatcacaaggagatcatgagcaggataacacgaaaacag
gaaaatgacgacgggccggatgtgcgcgccggatcgggagatattttattggtccacgcc
acggagacggaccgcaaagatctggttttgtactgtgaagcctttttgacgacgtacagg
acgttcataagccccgaggacctcatcaagaagctacactacagatacacgagcttttgc
cacagtccagacacgttcaagaagcgagtcagcaagaacaccttctttgtgttggtgcgt
gtggtggacgagctctgcctggtggagctgacggaggacatcctgaagcagctgatggac
ctggtcttcacgctggtctgcaacggggagctgagcttggcccgggtcctgcgcaagaac
atcctggacaaggtggagcagaagaagctgctgcgctacaccaactcgctcaagccgctc
gccgcccgaggcgtctcggcgaggcccggaacgctgcacgacttccgcagtcacgagatc
gccgaccagctcacgcttctcgacgccgagctcttctacaaaattgagattccggaggtg
ctgctttgggccaaggagcagaacgaagagaagagtccgaacctgacgcagttcacggag
cactttaacaacatgagctactgggtgcgctctctcatcattcagcaagaaaaagcccaa
gaccgagagaagctgctgctcaagttcatcaagatcatgaagcacttaagaaagttgaac
aacttcaactcgtacttggccatcttgtccgccttggactcggcgcccatccggaggctg
gagtggcagaagcagacgtcggagggattggaggaatattgcacgttgatcgacagctcg
tcgtccttccgggcttaccgggccgccctggccgaagtggagccgccctgcatcccgtac
ttgggtctcatcttgcaggacctgaccttcgtccacctgggcaaccccgacctcatcgac
ggcaaagtcaacttctccaagcgatggcagcagttcaacatcctggacagcatgcggcgc
ttccagcaagtccactacgagctgaaacgcaacgacgacatcgtgtccttcttcaacgac
ttcagcgaccacctggccgaggaggcgctgtgggagctctcgctgaaaatcaagccgcgg
aacatcgcccgacgcaagacggagcgggacgagaagacttaa
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