Syngnathoides biaculeatus (alligator pipefish): 133515314
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Entry
133515314 CDS
T09681
Symbol
nefma
Name
(RefSeq) neurofilament, medium polypeptide a
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133515314 (nefma)
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
133515314 (nefma)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
ANG-1
HR1
Pro_CA_2
Tup_N
Motif
Other DBs
NCBI-GeneID:
133515314
NCBI-ProteinID:
XP_061703750
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All DBs
Position
17:16002943..16012370
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AA seq
988 aa
AA seq
DB search
MDPIGSPFRRVMDGRTSSYGYSRSAGTPATIGFRSQTWSRASPGSSVSASYKRSSNKPRG
DTFELSQSSLLGADSSRRSNEKEQLQGLNDRFAVYIDKVHYLEQQNKQIEDEIQALRHQQ
ASRSQLGDLFDQELQDLRATLEQIHRDKAQIQLDSDHLEDDIQRLRDRLDDEARIREDTE
AIIRVLKKDTGDSELLKSELEKKVQSLQDEIAFIRNNHEEEVNELLGHIQASQVTVEKRD
PQRADITEALREIRSELEGHSDQNLQQVESWFMCHYAKLNEASEQNKDAIKSARDEINDY
RRQLQSKTVELESVRGTRDSLERQLGDIEDRHNSDLASLQETIHQLDNELKSTKWEMARH
LREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTFSHRPAVSSTRISISKSEAPRMKVQH
KFVEEIIEETRVEDDKADMEEALDQIAQELSATLEGSGGEEEEEDAEVEEEEVVAVTDAK
VSSKAPAEEEEEEDDEEGEEDDKEENEEDGDEGKGEEPGDDEAVVEETVLCSKTHESKAT
PEKVKAGEEEDEEGEEEASGGEEEADKASKDGDDKEEKADEDEGKEDEKVKVEDVVTETI
VAKVEVQKTEAAKPEAKKEESVTVELTKPDSLKTESPKAVSPKSESPKTASPKPQSPKTG
SPKSESPKAGSPKSESPKAGSPKSESPKAGSPKTESPKAGSPKSDSPKPGSPKTESPKAG
SPKIESPKPLSPKSESPKPGSNSESPKAGSPKSESPKPASPKEDSPKTTPPKAESPKSEA
PKPASPKEDSPKAGSPKAESPKSESPKASSPKTESPKLESLKPGSPKEDSPKATSPKAES
PKPDPTKPDSPKAESPETETKKLDTPKPAEDKKSDSADDKKMKDAAMNGDVDKTSPEEAE
KKKADGNDVIINGVDESPVKDDGSQKVVTTKTVETIITGEDGLQQVTKSVTVTETVKEVE
EVLQEKMVSTVKTERHSSHSIKQVTEGD
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggaccccatagggagccccttcaggagagttatggacggcaggacgagcagctacggc
tacagccgctccgcgggcacccccgccaccattggattccgctcccagacgtggtctcgg
gccagccccgggtccagcgtgagcgcgtcgtacaagaggagctcgaacaagccccgcggg
gacactttcgagctgagccaaagttccctcctgggcgcggactcctccaggcgctccaac
gagaaggagcaactccaagggctcaacgaccgcttcgccgtgtacatcgacaaggtgcat
tacctggagcagcagaacaagcagatcgaggacgagatccaggccctgcggcaccagcag
gcgtcccgctcgcagttgggcgacctgttcgaccaggagctgcaggacctgcgcgccacg
ctggagcagatccaccgcgacaaggcgcagatccagctcgacagcgaccatctggaggac
gacatccagaggctgagggaccgcctggacgacgaagcccgcatccgggaggacaccgag
gccatcatccgcgtcctcaagaaggacaccggcgactcggagctgctcaagtccgagctg
gagaagaaagtgcagtcgctgcaggacgagatcgccttcatccgcaacaaccacgaagaa
gaagtgaacgagctcctgggccacatccaggcgtcccaggtgaccgtggagaagagggac
ccgcagcgggccgacatcaccgaggctctgcgcgagattcgcagcgagctggagggccac
tcggaccaaaacctgcagcaggtggagagctggttcatgtgccactacgccaagctcaac
gaggcgtccgaacagaacaaggacgccatcaagagcgcccgcgacgagatcaacgactac
cggcgccagctgcagtccaagacggtggagctggagtcggtgcgcggcaccagagactcg
ctggagaggcagctgggcgacatcgaggaccgccacaacagcgacctcgccagcctgcag
gagacgatccaccagctggacaatgagctcaaaagcaccaaatgggagatggcccgccat
ctgcgcgagtaccaggacctgctcaatgtcaagatggccctggacattgagattgctgca
tacaggaaactcctggagggtgaggagacccacttcagcacattctcccatcgcccagcg
gtttcatccaccagaatatcaatatccaaatcagaagctcccaggatgaaggtgcaacat
aaatttgtcgaggagatcatcgaggagaccagggtggaggatgacaaagccgacatggag
gaggccttggatcagattgcccaggagctctcggccacactggaaggcagtggaggggag
gaggaagaggaggacgctgaggtggaggaagaggaagtcgtagctgtaaccgatgctaag
gttagttcgaaagcaccggccgaggaggaagaagaagaggacgacgaagagggggaggaa
gatgacaaggaggaaaatgaagaagatggggacgaggggaaaggagaggagccgggtgac
gacgaggcggtagtcgaggaaactgtcctgtgctccaaaactcatgagtcgaaagccact
cctgagaaagtgaaagctggagaggaagaagatgaagagggagaagaagaggccagcggg
ggagaagaggaagccgacaaagcatccaaagatggagacgataaggaagaaaaggcggat
gaggacgaaggcaaagaagatgagaaggtaaaggttgaagacgtggtgacggaaacaatt
gtagccaaagtagaagttcagaaaacagaagctgcgaaacctgaagccaaaaaggaagaa
agtgtcacggtagaactgacaaaaccagattccctcaaaactgaatccccaaaagctgtt
tccccaaagtctgaatcccccaaaacagcttccccaaagcctcaatccccaaaaactggt
tccccaaagtctgaatccccaaaagccggttccccaaagtctgaatctccaaaagccggt
tccccaaagtctgaatctccaaaagctggttcccccaagacagaatctccaaaagctggt
tctccaaagtctgactccccaaagcctgggtcccccaagacagaatccccaaaagctggt
tcacccaagatagaatcccccaaacctctgtcccctaaatctgaatccccaaagcctggt
tcaaattcagaatcgccaaaagcagggtcccctaaatcagaatcgcccaagccagcatct
cccaaagaagactcaccaaaaactacccctccaaaagcagagtctcctaaatcggaagct
cctaagcccgcatcacccaaagaagactcgcccaaggctggctcccccaaagcagagtcc
cctaaatcagaatctcccaaggctagctcccccaaaacagaatcccctaaattagaatct
ctcaagcctggatcccccaaagaagactcaccgaaggccacctccccaaaagcagagtcc
cccaaacctgatcctacaaagccagactcgccaaaggctgaatctcctgagacggaaacg
aaaaaactcgacacacccaagcctgccgaagacaaaaagagcgactccgcagacgacaag
aagatgaaggacgcggccatgaacggcgacgtggacaagacgagcccggaggaagcggag
aagaaaaaggccgacgggaacgacgtgatcatcaatggcgtggacgagagtcccgtcaag
gacgacgggagccagaaggtggtgaccaccaaaacggtggagaccatcatcacgggggag
gacggcttgcagcaggtcaccaagtcggtcaccgtcaccgagacggtgaaggaggtggag
gaggtgctgcaggagaagatggtctccaccgtcaagacggagaggcactccagccattcc
atcaagcaggtgacggagggggactga
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