KEGG   Sanguibacter biliveldensis: SANBI_000603
Entry
SANBI_000603      CDS       T10642                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sbil  Sanguibacter biliveldensis
Pathway
sbil03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sbil00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SANBI_000603
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbil03019]
    SANBI_000603
Messenger RNA biogenesis [BR:sbil03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SANBI_000603
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 YicC-like_C
Other DBs
NCBI-ProteinID: WPF84181
UniProt: A0AAF1BZS1
LinkDB
Position
complement(692076..693746)
AA seq 556 aa
MTLSAPPALQRGALRIVPLGGLGEVGRNMTVFEHEGKLLIVDCGVLFPEEHQPGIDVILP
EFTWIRDRLKDVVAIVLTHGHEDHIGGVPYLLKERADIPVIGSKLTLAFITAKLKEHRIR
PRTIEVEAGGTSKQGPFDLEFIAVNHSIPDALAVAIRTRAGLVINTGDFKMDQFPLDSRI
TDLGHFARLGEEGVDLFMTDSTNAEVPGFTMSEQELVPAIEQVFRTAPRRVIVSSFASHV
HRIQQILDSAHEAGRKVAFVGRSMVRNMGIAEELGYLKIPRGLVVDLKKLESMPPEKICL
VCTGSQGEPMAALSRMAKSEHVIKVDEGDTVLLASSLIPGNENAIYRVINALTDLGATIV
HKGNAKVHVSGHASAGELVYCYNIVKPRNVMPIHGESKHLRANGALAEKTGVPSNNVVIA
QDGTVVDLFKGKLSVVGKVPAGYVYVDGQTVGTATEDTLAERRALGSKGIVTVLALVDLD
LGVMAETPEFITRGFVHDGHTFDDAVVEIEKALAQIPKKDVGDIDRLEATIAKAVSRWLQ
RKYRREPLVNAIVVDA
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgactctctcagcgcccccggcgctccagcgcggtgccctgcgcatcgtgccgctcggc
ggcctcggcgaggtcggccgcaacatgaccgtcttcgagcacgagggcaagctgctcatc
gtcgactgcggcgtcctcttccccgaagagcaccagcccggcatcgacgtgatcctcccc
gagttcacctggatccgtgaccgcctcaaggacgtcgtcgcgatcgtcctcacgcacggc
cacgaagaccacatcggcggtgtcccgtacctgctcaaggagcgcgcggacatccccgtc
atcggctccaagctgaccctcgccttcatcaccgcgaagctcaaggagcaccgcatccgc
ccccgcacgatcgaggtcgaggccggcggcacctccaagcagggtcccttcgacctcgag
ttcatcgcggtcaaccactccatccccgacgccctcgccgtcgcgatccgcacccgtgcg
ggtctggtcatcaacaccggtgacttcaagatggaccagttcccgctcgactcgcggatc
acagacctgggccacttcgcacgcctcggcgaagagggcgtggacctgttcatgaccgac
tcgaccaacgccgaggtccccggcttcaccatgtcggagcaggagctcgtccccgcgatc
gagcaggtgttccgcacggccccgcgccgcgtcatcgtgtcgagcttcgcgagccacgtg
caccgcatccagcagatcctcgactccgcccacgaggccggccgcaaggtcgccttcgtc
ggccgctcgatggtccgcaacatggggatcgccgaagagctcggctacctcaagatcccg
cgcggcctcgtggtcgacctcaagaagctcgagtcgatgccgcccgagaagatctgcctc
gtgtgcacgggctcgcagggcgagccgatggccgcgctgtcgcgcatggccaagagcgag
cacgtcatcaaggtcgacgagggtgacaccgtcctcctcgccagctcgctgatcccgggc
aacgagaacgcgatctaccgcgtcatcaacgccctcaccgacctcggcgcgaccatcgtg
cacaagggcaacgcgaaggtgcacgtctcgggccacgcctccgcaggcgagctcgtgtac
tgctacaacatcgtcaagccccgcaacgtcatgccgatccacggcgagtcgaagcacctg
cgcgccaacggcgccctggccgagaagaccggcgtgccctcgaacaacgtggtcatcgcc
caggacggcacagtcgtcgacctcttcaagggcaagctctcggtcgtcggcaaggtcccc
gcgggctacgtgtacgtcgacggccagaccgtcggcaccgcgaccgaggacaccctcgcc
gagcgccgcgcgctcggctccaagggcatcgtcacggtcctcgcgctcgtcgacctcgac
ctcggtgtcatggccgagacccccgagttcatcacccgcgggttcgtgcacgacgggcac
accttcgacgacgcggtcgtcgagatcgagaaggccctcgcgcagatccccaagaaggac
gtcggcgacatcgaccgcctcgaggcgaccatcgccaaggccgtctcgcgctggctccag
cgcaagtaccgccgcgagccgctcgtcaacgcgatcgtcgtcgacgcgtga

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