Sanguibacter biliveldensis: SANBI_001127
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Entry
SANBI_001127 CDS
T10642
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
sbil Sanguibacter biliveldensis
Pathway
sbil03018
RNA degradation
Brite
Enzymes [BR:
sbil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
SANBI_001127
Messenger RNA biogenesis [BR:
sbil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SANBI_001127
Ribosome biogenesis [BR:
sbil03009
]
Prokaryotic type
rRNA processing factors
SANBI_001127
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WPF83449
UniProt:
A0AAF1C3X5
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Position
1316604..1320470
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AA seq
1288 aa
AA seq
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MTLDNTTTPDSTDATAKKPARRRVTRAAGNAAGTPAPDSTQAAPPAAQAAAPDTQAAPAA
AQAAPEQPAEKPVRRRATSKKAPAAAETPAAEPAPAAQQAPAAQTAATAPAETPAADSAP
AAPVKAPRRSRRVVKTTEQLDVFAELSPTTTPAAEAAPTTPVAASQPEAQQPATSSQTTA
DEPATSAAPAAPARRRRAATRPASSATPTTSTTPTTSTAPAAQEPAEAAPAAAEAPAAAT
ADQPAEPTTTSGRAPRRSRSRAAAPATTPSHEEEVASLDVVASIEALAAEPAAPARRSRR
ATSSAPRTTAPALFEDAEVTRPRRAATRRAAAPAPVEAETAEASAPVEAPVAAAATTAPA
TTAPEAAAEAPRKTRSRRSRSAETVETPAAPVAERAAAPEQVQADEAPVDEASAEEPQAP
RRTTALLFQAPDPEAARPRRRRAQTPAGPPKAVSEAAAAAADEVLEDEDAESTEDVLALD
ASLDALTPATEDEGTDTSEDDSDDTEDEDDNGQPRRRRRRGGRGRRNRGGSDSRDEDSRD
SRGASQDDESSEDSDDEDDEDEGSDEPRGRSENGRSRSRRRGRGAAPAQDADTQDDDSES
SSDEETDSDEHDDSDDSASSRRRRRRRRGSRGSDSDAAPAAASSGRSTAASTGSSSRSGR
TGADEVTALKGSTRLEAKRQRRREGRDAGRRRSIITEAEFLARREAVERSMIVRERNGRT
QIAVLEDGVLVEHYVSQQSQASMAGNVYLGRVQNVLPSMEAAFVDVGKGRNAVLYAGEVN
WDAHGLEGAPRRIEQALKSGDSVLVQVTKDPIGQKGARLTSQVTLAGRYLVYVPGGGMTG
ISRKLPDTERARLKKILREVVPETAGVIVRTAAEGASEDELRADIARLQGQWEAIEKKSK
TASAPALLQGEPDLAIRVVRDIFNDDFSSLTISGDGAWSEISEYVNALAPDLAGRVKRWT
SEKDVFAEARIDEQLAKGMDRKVWLPSGGSLVIDRTEAMTVVDVNTGKFTGSGGTLEETV
TRNNLEAAEEIVRQLRLRDIGGIIVVDFIDMVLESNRDLVLRRMVECLGRDRTKHQVAEV
TSLGLVQMTRKRVGQGLVEAFSETCDHCNGRGFIVHDEPNEKHFQGGSQPSGAQVAAQAA
ASAPADGDSKRARRKRGAKETETVPAVPVLPEAREAVKATLATIAAAAAHAHEHDDEHTD
GAEHGADEHGAGVEQGVVVTVDVETAEVVDVRQHGAESVTDASSESVEQPGAAEAQEPRR
PVLDVVAELRSVRRPVSGQGRGEQNDQQ
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctcgacaacacgaccacccctgacagcacagacgcgacagcgaagaagccggcg
cgacgccgggtgacccgcgccgcaggaaatgctgcaggcacgccagcccccgactccacc
caggcggcacctcccgccgctcaggcggcagccccagacacccaggcggcacccgccgcc
gcgcaggccgctccggagcagcccgccgagaagcccgtccgccgtcgcgcgacgagcaag
aaggcccccgcagcggccgagaccccggcagccgagccggccccggcagcacagcaggcc
cccgcagcgcagaccgccgcgacggcacctgccgagaccccggccgcagactctgctccc
gctgcacccgtgaaggcgccccgccgctcacgccgtgtcgtcaagacgaccgagcagctc
gacgtcttcgccgagctctcgcccacgaccaccccagccgccgaggccgcaccgacgacg
ccggtcgccgcatcgcagcccgaggcgcagcagccggcgacctcgtcgcagaccaccgcg
gacgagcccgcgacgtcggcagccccggctgccccggcacggcgccgccgcgccgccacc
cgcccggcgtcgagcgcgacaccgacgaccagcacgacaccgacgaccagcacggctccg
gcagcccaggagcccgccgaggcggctccggccgcggccgaagccccggccgccgccacg
gcggaccagccggccgagccgaccacgacgagcggccgcgccccgcgccggtctcgctcg
cgcgccgcagcaccggcgaccaccccgagccacgaggaagaggtcgcgagcctcgacgtc
gtcgcgtcgatcgaggcgctcgccgctgagcctgcagcaccggcccgccggagccgccgc
gccaccagctccgcgccgaggaccaccgccccggccctcttcgaggacgccgaggtcacc
cgcccgcgccgtgccgcgacccgcagggccgccgcccccgcgcccgtcgaggctgagacc
gccgaggcctctgcacccgtcgaggccccggtggccgctgctgcgacgactgctcctgcc
acgactgctccggaggctgccgccgaggccccgcgcaagacgcgcagccgtcgctcgcgc
tctgccgagaccgtcgagacaccagccgcacccgtcgccgagcgcgctgcggcacccgag
caggtccaggccgacgaggccccggttgacgaggcctccgccgaagaacctcaggcaccg
cgccgcacgacagcgctgctgttccaggctccggacccggaggccgcgcgtccgcgtcgt
cgccgcgcgcagacccccgcgggtccgcccaaggccgtctccgaggctgcggctgccgcg
gcagacgaggtgctcgaggacgaagacgccgagtcgaccgaggacgtcctcgcgctcgac
gcgagcctggacgccctgaccccggcgaccgaggacgagggcacggacacctctgaggac
gactccgacgacaccgaggacgaggacgacaacggccagccgcgccgtcgccgccgtcgt
ggtggtcgcggacgccgcaaccgtggcggctcggactcgcgcgacgaggactcccgagac
tctcgtggcgccagccaggacgacgagtcctccgaggactccgacgacgaggacgacgag
gacgaaggctccgacgagccgcgcggtcgatcggagaacgggcgttcgcgctcgcgtcgc
cgtggccgtggagcagctcctgcccaggacgccgacacgcaggacgacgactccgagagc
tcctcggacgaggagaccgactccgacgagcacgacgactcggacgactccgcgtcgagc
cgtcgccgtcgtcgtcgccgtcgtgggtcgcgcggctccgacagcgacgctgcccccgcc
gccgcgtcctcgggccgcagcacagctgccagcaccggctccagcagccgcagcggtcgt
acaggcgccgacgaggtcaccgccctcaagggctcgacgcgtctcgaggccaagcgccag
cgccgccgtgagggccgcgacgccggtcgccgccgctcgatcatcaccgaggccgagttc
ctcgcccgccgcgaggccgtcgagcgctcgatgatcgtccgcgagcggaacggtcgcacg
cagatcgccgtgctcgaggacggcgtgctcgtggagcactacgtctcgcagcagtcgcag
gcctcgatggccggcaacgtgtacctcggccgggtgcagaacgtgctcccgagcatggag
gccgccttcgtcgacgtcggcaagggccgcaacgccgtgctctacgccggtgaggtcaac
tgggacgcccacggtctcgagggtgcaccgcgccgcatcgagcaggcgctcaagtcgggt
gactcggtcctggtgcaggtcaccaaggacccgatcgggcagaagggcgctcgcctcacc
tcgcaggtgaccctcgcgggtcgctatctcgtctacgtccccggcggcggcatgacgggc
atctcgcgcaagctcccggacaccgagcgtgcccgcctcaagaagatcctccgcgaggtc
gtccccgagaccgccggtgtgatcgtccgtaccgcggccgagggcgcgagcgaagacgag
ctgcgcgccgacatcgcccgtctgcaggggcagtgggaggccatcgagaagaagtccaag
accgcgtcggcgcctgctctgctccagggcgagccggacctcgcgatccgcgtggtgcgc
gacatcttcaacgacgacttcagctcgctgacgatctcgggcgacggcgcgtggtcggag
atctccgagtacgtcaacgccctcgcccccgacctcgccgggcgcgtcaagcgctggacg
agcgagaaggacgtcttcgccgaggcgcggatcgacgagcagctggccaagggcatggac
cgcaaggtctggctgccctcgggtggctcgctcgtgatcgaccgcaccgaggccatgacc
gtcgtcgacgtcaacaccggcaagttcacgggctcgggcggcacgctcgaggagaccgtc
acgaggaacaacctcgaggcggccgaggagatcgtccggcagctgcgtctgcgcgacatc
ggcgggatcatcgtcgtcgacttcatcgacatggtcctcgagtccaaccgcgacctcgtg
ctgcgtcgcatggtcgagtgcctcggtcgcgaccggaccaagcaccaggtcgccgaggtg
acctcgctcgggctcgtgcagatgacccgcaagcgcgtgggccagggcctcgtcgaggcg
ttctcggagacctgcgaccactgcaacggccgcgggttcatcgtccacgacgagccgaac
gagaagcacttccagggcggctcccagccgtcgggcgctcaggtcgcggcgcaggctgca
gcctcggctcccgccgacggcgacagcaagcgcgcccgtcgcaagcggggtgccaaggag
accgagaccgtcccggcggtccccgtgctgcccgaggctcgcgaggccgtcaaggccacg
ctcgcgacgatcgccgcagcggcggcgcacgcccacgagcacgacgacgagcacaccgac
ggcgccgagcacggtgctgacgagcacggtgccggcgtcgagcagggcgtggtcgtgacg
gtcgacgtcgagaccgccgaggtcgtcgacgtccgtcagcacggcgcggagagcgtgacc
gatgcgtcctcggagagcgtcgagcagcctggcgccgcagaggcccaggagcctcggcgt
cctgtcctcgacgtcgtcgcggagctccgctctgtgcgtcgcccggtctccggccagggc
cgcggggagcagaacgaccagcagtga
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