Sphingomonas bisphenolicum: SBA_ch1_00140
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Entry
SBA_ch1_00140 CDS
T08354
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
sbin
Sphingomonas bisphenolicum
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbin02000
]
SBA_ch1_00140
Transporters [BR:
sbin02000
]
Other transporters
Pores ion channels [TC:
1
]
SBA_ch1_00140
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BBF67814
UniProt:
A0ABN5W6H0
LinkDB
All DBs
Position
1:complement(10154..11992)
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AA seq
612 aa
AA seq
DB search
MLKTGISLVALIVATPVWAQDDEIVVTATGIAQSRDEVGQAITVIDAETIKTRQAIDVVD
LLATTPGVRFNRNGSTGGVTGVSLRGAETTQTLVLIDGVKVNDPSGIGDGYDFGPLLTGN
IQRIEILRGSNSVVHGSQAIGGVVNLMTGVPAEGFGANASVDYGYSDTLSAKADVSGTSG
IAAGGLGAAYFRTDGISSAAGGTERDGTENIATNARLKLSFTDMLSLDLRGYYIHADLDY
DSFFGAPADSSDVSKLDQYVGYAGLNLALLDGKLTNRAAVTWMRNDRDYYFVRGTDPDYG
YSGTNLRFEYEGVYAPVDQAKLLFGYEHERPDYDFFGFGSTASAKINIDSVYALAIVKPF
AGLAVTGGVRHDDHSQFGGATTFGANANYSPNGGATNVRLSYGEGFKAPSLYQLYDSFSG
NAALRPERSKSYDVGFDQSLDGGRAMLSVTAFRRDTRNQINYDNATFTYGNLDRTRAKGV
EASIALKPVDALTVTGSYSYVDARDRSAGSADFGNRLARRAANAVSVSADYVWSFGLSTG
ATVTMVGDSFDNAANTRRLDGYALAGVRASMPLGAHLEVYGRIDNLFDETYQTAYGYGSY
GRAAYGGVRVRF
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaacaggcatttctctggtggcgctgatcgtggcgacgccggtatgggcgcag
gatgacgagatcgtcgtcaccgccacgggcattgcgcagtcgcgcgacgaggtcggccag
gcgattaccgtgatcgacgcggagacgatcaagacgcgccaggcgatcgatgtggtcgat
ttgctggcgacgacgccgggcgtgcgcttcaaccgcaacggatcgaccggcggcgtgacc
ggcgtgtcgctgcgcggcgcggagacgacgcagactttggtgctgatcgacggggtgaag
gtcaacgatcccagcggcattggcgacggctatgatttcgggccgctgctgaccggcaat
atccagcggatcgaaatattgcgcggttccaactcggtggtgcatggcagccaggcgatc
ggcggcgtggtcaacctgatgaccggcgtgccggccgagggcttcggcgcgaacgcatcg
gtggattatggctatagcgacacgctgagcgccaaggcggacgtgtcgggcaccagcggc
atcgccgcgggcggcctaggcgcagcctatttccgcaccgacggcatttcgtcggccgca
ggcgggacggagcgcgacgggaccgagaatatcgcgaccaacgcgaggttgaagctcagc
ttcaccgatatgctgagcctggacctgcgcggctattatatccatgccgacctcgactat
gacagcttcttcggcgcacccgccgacagcagcgacgtcagcaagctcgaccaatatgtc
ggctatgcgggcctcaacctggcgctgctggatggcaagctgaccaaccgcgccgccgtc
acctggatgcgcaacgatcgcgactattatttcgtgcgcggcaccgaccccgactatggc
tattcgggcaccaacctgcgcttcgaatatgaaggcgtctacgcgccggtcgaccaggcc
aagctgctgttcggctatgagcatgagcggccggattatgatttcttcggcttcggttcg
accgccagcgcgaagatcaacatcgacagcgtctatgcgctggcgatcgtcaagcctttc
gctggtttggccgtgaccggtggcgtgcgccatgacgaccatagccagtttggcggcgcg
acgaccttcggcgcgaacgccaattattcgcccaatggcggcgcgaccaatgtgcggctg
agctatggcgaagggttcaaggcgccgtcgctctatcaactgtacgacagctttagcggc
aatgcggcgctgcgccctgaacggtccaaaagctatgatgtcgggttcgaccagagcctg
gacggtggtcgggcgatgttgtcggtcaccgctttccgccgcgatacgcgcaaccagatc
aattatgataacgccaccttcacctatggcaatctggaccgcacccgcgccaagggcgtg
gaagcgtcgatcgcgctgaagccggtcgatgcgctgaccgtcaccggcagctacagctat
gtcgatgcgcgcgaccggtcggcagggtcggccgatttcggcaatcgcctggcccgccgc
gccgccaatgcggtgagcgtgtcggccgactatgtctggtcgttcggcctgtcgaccggc
gcgacggtcacgatggtgggcgacagcttcgacaatgcggcgaatacgcggcggctggac
ggctatgcgctggccggggtgcgggcctcgatgccgctgggcgcgcatctggaagtctat
ggtcgcatcgacaatctgttcgatgagacgtaccagacggcctatggctatggctcctat
ggccgcgctgcctatggcggcgtgcgtgtccgcttctga
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