Sphingomonas bisphenolicum: SBA_ch1_00170
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Entry
SBA_ch1_00170 CDS
T08354
Symbol
fdsA
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin00630
Glyoxylate and dicarboxylate metabolism
sbin00680
Methane metabolism
sbin01100
Metabolic pathways
sbin01120
Microbial metabolism in diverse environments
sbin01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SBA_ch1_00170 (fdsA)
09102 Energy metabolism
00680 Methane metabolism
SBA_ch1_00170 (fdsA)
Enzymes [BR:
sbin01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
SBA_ch1_00170 (fdsA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_9
Fer4_10
Fer4_21
Fer4_6
Fer4_8
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
BBF67817
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All DBs
Position
1:complement(13586..16432)
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AA seq
948 aa
AA seq
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MSFNRETDHGTPPALATGKSVTLTIDGQSVTLPEGTSIMRAASLTGGSIPKLCATDSVES
FGSCRLCLVEVEGRNGYPASCTTPVADGMVVRTQTDRLKQLRRGVMELYISDHPLDCLTC
GANGDCELQDQAGAVGLRDVRYGYDGATNMGQVKDQSNPYFDFDPSKCIVCSRCVRACEE
VQGTFALTIENKGFESKVSPSQGEDFLGSECVSCGACVQACPTASLIEKAVVEIGTPDRA
VVTTCAYCGVGCTFRAEMRGEELVRMVPWKDGKANRGHSCVKGRFAWGYAQHQDRILNPM
IRGSVSEPWSEVSWDEAIAYTASEFRRIQAKYGTRSIGGITSSRCTNEETFLVQKLIRQG
FGNNNVDTCARVCHSPTGYGLSQTFGTSAGTQDFDSVMAADVILVIGANPTDGHPVFASR
MKKRLRQGAKLIVIDPRRTDLVQSPHVAAEHHLPLRPGTNVAMLTAIAYVVVTEKLYDEA
FIRARCDWDEFADWADFVSEAARSPEAIEPLTGVKAQDVRAAARLYATGGNGAIYYGLGV
TEHSQGSSTVMAIANLAMATGNVGREGVGVNPLRGQNNVQGACDMGSFPHEFSGYRHVSD
TATRSLFERAWGVALDAEPGLRIPNMLDAATDGTFKGLFVQGEDILQSDPNTHHVAAGLA
AMECVVVQDLFLNETANYAHIFLPGSTFLEKDGTFTNAERRIQRVRKVMAPLNGYADWEI
VQLVANAMDLGWTYGHPSEIMDEIAALTPTFAGVHYDRLEAEGSLQWPANDAAPDGTPTM
HIDGFVRGKGKFVVTDYVPTDEKTGPRFPLLLTTGRILSHYNVGAQTRRTANTAWHPEDR
LEMHPSDADNRGLKDGDWVTLRSRAGETTLRALITERVAPGVVYTTFHHPETQANVITTD
YSDWATNCPEYKVTAVQVMASNGPSDWQQDYAQQARTSRRIAPLEAAE
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcaatcgcgaaaccgatcatggcacgccgccggcgctcgccacgggcaagtcc
gtcaccctgaccatcgacgggcagagcgtgaccctgcccgaaggcaccagcatcatgcgc
gcggcgtcgctgacgggcgggtcgatccccaagctgtgcgcgaccgacagtgtcgagagt
ttcgggtcgtgtcgcctctgcctggtcgaagtcgaaggccgcaacggctatcccgcgtcc
tgcaccacgccggtcgccgacggcatggtggtgcggacgcagaccgaccggctgaagcaa
ttgcggcgtggggtgatggaactgtatatctccgaccatccgctcgattgcctgacctgc
ggtgcgaacggggactgcgaattgcaggatcaggcgggcgcggtgggcctgcgcgacgtg
cgctatggctatgacggcgcgaccaatatggggcaggtaaaggaccagtcgaacccttat
ttcgacttcgatcccagcaaatgcatcgtctgttcgcgttgcgtgcgcgcctgcgaggaa
gtgcagggcacgttcgcgttgacgatcgagaataagggtttcgagtccaaagtgtcgccg
tcgcagggcgaggatttcctcggctccgaatgcgtgtcctgcggcgcgtgcgtgcaggcc
tgcccgaccgcgagcctgatcgaaaaggcggtggtggagatcggcacgcccgaccgcgcc
gtcgtcaccacctgcgcctattgcggcgtcggctgcaccttccgcgcggaaatgcggggc
gaggaactggtgcgcatggtgccgtggaaggacggcaaggccaatcgcggccatagctgc
gtcaagggccgcttcgcctggggctatgcgcagcatcaggaccggatattgaacccgatg
atccgcgggtcggtcagcgagccgtggagcgaagtgtcctgggacgaggcgatcgcctat
accgcgtccgagtttcgccggattcaggcgaaatatgggacgcgcagcatcggcggcatc
acgtcgagccgctgcaccaatgaggagacgttcctcgtccagaagctgatccggcagggg
ttcggcaataataatgtcgatacctgcgcgcgcgtctgccattcgccgaccggctatggt
ttgagccagactttcggcacgtcggcggggacgcaggatttcgacagcgtcatggccgcg
gacgtgatcctcgtcatcggcgccaatccgaccgatgggcatccggtcttcgccagtcgc
atgaagaagcgtttgcggcagggcgcgaagctgatcgtcatcgatccgcgccgcaccgat
ctggtgcaatctccccatgtcgcggcggaacatcatctgcccttacgacccggcaccaat
gtcgcgatgctgaccgcgatcgcctatgtggtcgtgaccgagaagctctatgacgaggct
ttcattcgggcgcggtgcgactgggacgagtttgccgactgggcggatttcgtgtcggag
gcggcgcgctcgcccgaggcgatcgagccgctgaccggcgtgaaggcgcaggacgtgcgc
gccgcggcgcggctctatgccaccggcggcaatggcgccatctattatgggttgggcgtc
accgaacattcgcagggcagttcgaccgtgatggcgatcgccaacctggccatggcgacc
ggcaatgtcgggcgcgagggcgtgggcgtgaacccgctgcgggggcagaataatgtgcag
ggggcctgcgacatgggcagcttcccgcatgaattttcgggctatcgccatgtgtccgac
accgcgacgcgcagcctgttcgagcgggcatggggcgtggcgctggacgccgagccggga
ttgcgcatccccaacatgctggacgccgcgaccgacgggacgttcaaggggctgttcgtg
cagggcgaggatatcctccagtccgatcccaatacccatcatgtcgcggcggggctggcg
gcgatggagtgcgtggtggtgcaggatctgttcctcaacgaaaccgccaattacgcccat
atcttcctgcccggatcgaccttcctggaaaaggacggcacgttcaccaatgccgagcgg
cgcatccagcgggtgcgcaaggtgatggcgccgctcaatggatatgcggattgggagatc
gtgcagttggtggccaacgccatggacttgggctggacctatggccacccgtccgaaatc
atggatgagatcgccgcgctcacgcccaccttcgccggcgtgcattatgaccggctggag
gcggaaggatcgctgcaatggccggccaacgacgccgcgcccgacggcacgccaaccatg
catatcgacggcttcgtgcgtggcaagggcaagttcgtcgtgaccgactatgtgccgacc
gacgagaagaccgggccgcgcttcccgttgctgctgacgaccgggcgcattttgagccac
tataatgtcggcgcgcagacgcggcggaccgccaatacggcgtggcatccggaagatcgg
ctggaaatgcatccgagcgatgcggacaatcgcggcctgaaggatggcgactgggtgacg
ctgcgcagccgggcgggggagacgaccctgcgcgcgctgattaccgagcgggttgcgccg
ggcgtggtctatacgaccttccaccatcccgagacgcaggcgaacgtcatcaccaccgac
tattcggactgggccaccaattgcccggaatataaggtgacggcggtgcaagtgatggcg
tcgaacgggccgagcgactggcagcaggattatgcgcagcaggcccggaccagccgccgc
atcgcgccgctggaagcggccgaatag
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