Sphingomonas bisphenolicum: SBA_ch1_01550
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Entry
SBA_ch1_01550 CDS
T08354
Symbol
rpoN2
Name
(GenBank) RNA polymerase sigma-54 factor 2
KO
K03092
RNA polymerase sigma-54 factor
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin02020
Two-component system
sbin02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SBA_ch1_01550 (rpoN2)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SBA_ch1_01550 (rpoN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbin03021
]
SBA_ch1_01550 (rpoN2)
Transcription machinery [BR:
sbin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SBA_ch1_01550 (rpoN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_38
Phage_CII
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
BBF67955
LinkDB
All DBs
Position
1:152161..153684
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AA seq
507 aa
AA seq
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MALGPRLDIRQSQSLVMTPQLQQAIKLLALSNLEIEAFVAGELEKNPLLESGGGEDAATA
PDGIDRSVDAPTLSAETGATDDLIAQGLGGADSPLDVDHGADSFIDDGPGDRMADAHGAS
GGGMDALSGGYSEDAPDFDSFAAPDIGLQEHLMGQARAALSGMDLFIATQLIGQISEAGY
LEANLLQTAHGLGVPLFDVERVLGVIHRFDPTGVGARSLSECLALQAKEADRYDPCMARL
LANLDLLAKGALPQLRRICGVDEEDMADMIAELRGYDPKPGLRFADDRAAPVTPDLFVRP
AKDGWAIEINSATLPRLLVNRSYYVELATGPQDKSAKAWLADCLASANWLVKALDQRQKT
IIKVASEIVRSQEAFFQQGVAHLKPLTLRAVADTIGMHESTVSRVTSNKYLSCPRGLYEL
KYFFTSGVSSSGGDGGSVSAEAVKSHIKALIGAEDPQAILSDDTLVDLLRAKGMDIARRT
VAKYREALGIGSSVQRRRQKALKGKAA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgggccacgcctggacattcgccagagccagtcgctcgtcatgacgccccag
ctccagcaggcgatcaagctgctggcgctgtccaatctggagatcgaggcgttcgtcgca
ggcgagctggaaaaaaacccgctgctcgaatcgggcggcggcgaagacgcggccaccgcc
cccgacggcatcgaccgtagcgtggacgcccccacgctttccgccgaaacgggcgccacc
gacgatctgatcgcacaggggctgggcggcgccgacagcccgctcgacgtcgatcatggc
gcagacagcttcatcgacgacggaccgggagaccgcatggccgacgcgcatggcgccagc
ggcggcggcatggacgcgctgtcgggcggctatagcgaagatgcacccgacttcgacagt
ttcgccgcgcccgacatcggcctgcaggaacatctgatggggcaggcccgcgccgccttg
tcaggcatggacctgttcatcgccacccagttgatcggccagatcagcgaggccggctat
ctggaggccaacctcctgcaaaccgcccacgggctgggcgttccgctcttcgacgtcgaa
cgcgtgctgggcgtcatccacagattcgatcccaccggcgtcggcgcccgctccctgtcc
gaatgcctcgcgctacaggcgaaggaagccgaccgctacgatccctgcatggcccgcctg
ctcgccaatctcgacttgctcgccaagggcgcgctgccccagttgcgccgcatctgcggc
gtggacgaagaggatatggccgacatgatcgcggagttgcgcggttacgatcccaagccc
ggcctgcgcttcgccgatgatcgcgccgccccggtcacgcccgacctgttcgtgcgcccg
gccaaggacggctgggccatcgagatcaacagcgccaccctgccccgcctgctcgtcaac
cgcagctattatgtcgaactggccaccggcccgcaggacaagagcgccaaggcctggctg
gccgactgcctcgccagcgccaactggctggtcaaggcgctggaccagcggcagaagacg
atcatcaaggtggcgagcgagatcgtgcgcagccaggaggcatttttccagcagggcgtc
gcgcacctcaagcccctgacgctgcgcgcggtggccgacacgatcggcatgcacgaaagc
accgtcagccgcgtgacctccaacaaatatctgtcctgcccgcgcggcctctacgaactg
aaatatttcttcaccagcggcgtgtcgtcatcgggcggcgatggcggttccgtctccgcc
gaagcggtcaagagccacatcaaggcgttgatcggcgccgaagacccgcaggcgatcctg
tccgacgacacgctggtcgacctgctccgcgccaagggcatggacatagcccgccgcacc
gtggccaaatatcgcgaggcgctggggatcggctcgtcggtgcagaggcggcgacagaag
gcgctgaaggggaaggcggcatag
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