Sphingomonas bisphenolicum: SBA_ch1_01810
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Entry
SBA_ch1_01810 CDS
T08354
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SBA_ch1_01810 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbin03400
]
SBA_ch1_01810 (ung)
Enzymes [BR:
sbin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SBA_ch1_01810 (ung)
DNA repair and recombination proteins [BR:
sbin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SBA_ch1_01810 (ung)
Prokaryotic type
SBA_ch1_01810 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BBF67981
LinkDB
All DBs
Position
1:176843..177556
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AA seq
237 aa
AA seq
DB search
MSDTIKLHESWRAPLADQFAAPHMQGLKHFLQAEKAAGKRIFPKGSEYFRALDLTPLDQV
KAVILGQDPYHGEGQAHGLCFSVQPGVRTPPSLVNIYKEMEADLGIPRASHGFLEHWARQ
GVLLLNSVLTVEMGRAASHQGKGWELFTDAVVRIVAQKEEPVVFLLWGAYAQRKAGFVDQ
SRHLVIKSAHPSPLSAHNGFLGSRPFSRANAFLEAKGRGAIDWALPPLGGGQQALSL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccatcaagctgcacgaaagctggcgcgcgccgctggccgaccaattcgcc
gccccgcacatgcagggactgaaacatttcctgcaggcggagaaagcggcggggaagcgc
atcttcccgaaaggcagcgaatatttccgcgcgctggacctgaccccgctggatcaggtg
aaagccgtgatattggggcaagacccctatcatggcgaagggcaggcccatggcctgtgc
ttttcggtacagccgggcgtgcgcacgccaccgtcgctggtcaatatctacaaggagatg
gaggcggatctgggcatcccacgggccagccatggctttctggagcattgggccagacag
ggcgtgctgctgctcaacagcgtgctgacggtggagatggggcgggccgcgtcgcatcag
ggcaagggctgggaactgttcaccgacgcggtggtgcggatcgtcgcacagaaggaagag
ccggtcgtcttcctgttgtggggcgcctatgcgcagcgcaaggcgggcttcgtcgatcag
agccgccatctggtcatcaagtccgcgcacccctcccccctttccgcgcacaacggtttt
ctgggatcgcggcccttttccagggccaacgcctttctggaagccaagggccgcggtgcg
atcgactgggcgctgccgccattgggcggcgggcagcaggcgctgtctctttag
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