Sphingomonas bisphenolicum: SBA_ch1_01830
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Entry
SBA_ch1_01830 CDS
T08354
Name
(GenBank) hypothetical protein
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SBA_ch1_01830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbin03021
]
SBA_ch1_01830
03400 DNA repair and recombination proteins [BR:
sbin03400
]
SBA_ch1_01830
Enzymes [BR:
sbin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SBA_ch1_01830
Transcription machinery [BR:
sbin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SBA_ch1_01830
DNA repair and recombination proteins [BR:
sbin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SBA_ch1_01830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
BBF67983
LinkDB
All DBs
Position
1:complement(178140..178484)
Genome browser
AA seq
114 aa
AA seq
DB search
MARVTVEDCVDKVTNRFDLVLLAAQRAREISGGAELTLDRDRDKNPVVALREIAEETVLP
ADLHDSVVASLQKVQIDDDDTPDEIGSIAQSAEALRLTAAAPPRNQNIGGDYDG
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
ttggcccgcgttaccgtcgaagattgcgtcgacaaggttaccaaccgttttgacctcgtc
ctgctcgccgcccagcgcgcgcgggagatttccggcggcgccgagctgacgctcgaccgc
gaccgggacaagaatccggtcgtcgccctgcgcgagatcgccgaggaaaccgtcttgcct
gccgatctgcatgattcggtcgtcgcgtcgctgcagaaggtgcagatcgacgatgacgat
acgccggacgagatcggttcgatcgcccagtcggcggaggctctgcgcctgaccgccgcc
gcgccgccgcgcaaccagaatattggcggcgattacgacggctga
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