Sphingomonas bisphenolicum: SBA_ch1_03790
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Entry
SBA_ch1_03790 CDS
T08354
Symbol
aspS
Name
(GenBank) aspartate--tRNA(Asp/Asn) ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SBA_ch1_03790 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbin01007
]
SBA_ch1_03790 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbin03016
]
SBA_ch1_03790 (aspS)
03029 Mitochondrial biogenesis [BR:
sbin03029
]
SBA_ch1_03790 (aspS)
Enzymes [BR:
sbin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
SBA_ch1_03790 (aspS)
Amino acid related enzymes [BR:
sbin01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SBA_ch1_03790 (aspS)
Transfer RNA biogenesis [BR:
sbin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SBA_ch1_03790 (aspS)
Prokaryotic type
Other AARSs
SBA_ch1_03790 (aspS)
Mitochondrial biogenesis [BR:
sbin03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SBA_ch1_03790 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
BBF68179
LinkDB
All DBs
Position
1:complement(397152..398936)
Genome browser
AA seq
594 aa
AA seq
DB search
MHAYRTHTCGALTTADVGTEVRVSGWVHRKRDHGGVLFVDLRDHYGITQVVAKADSDPLR
ALESLRLESVVTINGHVVARAPEAINPRMETGEIEIVADSVTILSTAAELPLPVAGEQDY
PEDIRLRYRFLDLRRETLHANIVKRTKIISDMRRRMEGIGFTEYSTPILTASSPEGARDF
LVPSRIHAGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE
MSFVTQEDVWNTMEPVIAQVFEQFADGKPVTPAGSFPRIPHAEALLKYGSDKPDLRNPIL
ITDVTEHFVGSGFGIFASLVDSGSVIRAIPAPGAGAGSRKFFDEMNNWARAEGYSGLGYI
NIKDGVPGGPIAKNHGEEATAKLIAALGLGPNDGVFFAAGKEGQAAKLAGLARTRVGETL
NLIDKDRFDLCWIVDFPFYEYDEDTKSVDFAHNPFSMPQGGLDALNNQDPLTINAYQYDM
VCNGYEIASGSIRNQSPELMVKAFELVGLSQQDVEDRFGGLYRAFQYGAPPHGGMAAGVD
RIVMLLCGAQNLREITLFPMNQRAEDLLMGAPSAAEFKQLRELHVRVVEPQAKG
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcctatcgcacccacacctgcggcgccctgaccacagccgatgtcggcactgag
gtccgcgtgtcgggctgggtgcatcgcaaacgcgatcatggcggcgtgttgttcgtcgat
ctgcgcgaccattatggcatcacgcaggtggtggcgaaggcggacagcgatccgctccgc
gcgcttgaaagcctccgtctcgaatccgtcgtgacgatcaacggtcatgtcgtggcgcgc
gcgcccgaagccatcaacccccggatggaaaccggtgagattgagattgtggccgacagc
gtcaccatcctctccaccgccgccgaattgccgctgccggtcgcgggcgagcaggactat
cccgaagatatccgcctgcgctaccgcttcctcgatctgcgccgcgaaacgctgcacgcc
aatatcgtcaagcgcacgaagatcatctcggacatgcgccgccgcatggaaggcatcggc
ttcaccgaatattcgacgccgatcctgaccgcttccagccccgaaggcgcacgcgacttc
ctggtgcccagccgcatccatgcgggcaaattctacgccctgccgcaggcgccccagcaa
tataagcagttgctgatggtcgcaggcttcgaccgctatttccagatcgccccctgcttc
cgcgacgaagacccgcgtgccgaccgcctgcccggcgaattctaccagctcgatctggaa
atgagctttgtcacccaggaagatgtctggaacacgatggagccggtcatcgcgcaggtg
ttcgaacagttcgccgatggcaagccggtcacgcccgcaggcagcttcccgcgcatcccg
cacgccgaagcgctgctgaaatatggcagcgacaagcccgacctgcgcaaccccatcctc
atcaccgacgtgaccgagcatttcgtcggatcgggctttggcatcttcgcgtcgctggtc
gacagcggcagcgtgatccgcgcgatcccggcgcccggcgcaggcgcaggcagccgcaaa
ttcttcgacgaaatgaacaattgggcgcgggccgagggctattcgggcctgggctatatc
aacatcaaggatggcgtccccggcggcccgatcgccaagaatcatggcgaggaagcaacc
gccaagctgatcgccgcgctcggccttggccccaatgacggcgtgttcttcgctgcgggc
aaggaaggccaggccgccaagctggccggcctcgcccgcacccgcgtcggcgaaacgctg
aacctgatcgacaaggaccgcttcgacctgtgctggatcgtggacttccccttctacgaa
tatgacgaagacaccaagtcggtcgatttcgcgcacaaccccttctcgatgccgcagggg
ggcctcgacgcgctgaacaaccaggatccgctgacgatcaacgcctatcaatatgacatg
gtctgcaacggctatgagatcgcgtcgggatcgatccgcaaccagtcgcccgagctgatg
gtcaaggcgttcgaactggtgggcctcagccagcaggatgtcgaagaccgcttcggcggc
ctctaccgcgccttccagtacggcgcgccgccccatggcggcatggcggcgggcgtcgac
cgcatcgtgatgctgctgtgcggcgcgcagaatctgcgcgaaatcacgctgttcccgatg
aaccagcgcgccgaagacctgctgatgggcgcgcccagcgcggccgaattcaagcaactg
cgcgaactccatgtccgcgtcgtggagccgcaggcgaagggttga
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