Sphingomonas bisphenolicum: SBA_ch1_05770
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Entry
SBA_ch1_05770 CDS
T08354
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SBA_ch1_05770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbin03400
]
SBA_ch1_05770
Enzymes [BR:
sbin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SBA_ch1_05770
DNA repair and recombination proteins [BR:
sbin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SBA_ch1_05770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BBF68377
UniProt:
A0ABM7FXI2
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All DBs
Position
1:609105..609902
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AA seq
265 aa
AA seq
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MADTLSICSWNINSVRARIDIVEQLLRLEAPDILCLQETKVVNETFPTEMFRRMGYVHQV
LNGQRMHHGVAIMSKVPVHEDDRFDWQANGEARHVGVRLDNGVRIENVYVPAGGDIPDRD
LNPKFGQKMDFLERMIQWSSALGSQPAILTGDFNIAPLECDVWSHKQLLNVVSHTPGECE
ILARLQASNDWVDIGRHFHPAPARLYTWWSYRAKDWAESDRGRRLDHMWMTKDVANKATS
HRVVEPARSWIKPSDHIPIITEFAF
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaccctctctatctgctcctggaacatcaactccgtccgcgcgcgcatcgac
atagtcgaacagctgctgcggctcgaagcgccggacatattgtgcctgcaggaaaccaag
gtggtgaacgagaccttccccaccgaaatgttccgccgcatgggctatgttcatcaggtg
ctgaatggccagcgtatgcaccatggcgtcgcgatcatgagcaaggtgccggtgcatgag
gatgaccggttcgactggcaggccaatggcgaagcgcgccatgtcggcgtgcggctcgac
aatggcgtgcggatcgagaatgtctatgtgcccgccggtggcgacattcccgaccgtgat
ctcaatcccaaattcggccagaagatggatttcctcgaacggatgatccaatggtcgtcc
gcgctaggcagccaacccgccatcctgaccggcgacttcaacatcgccccgctggaatgc
gacgtctggagccacaaacagttgctcaacgtcgtcagtcacacgccgggggaatgtgaa
atcctcgcccggttgcaggcgtcgaacgactgggtcgatatcggccgccatttccatccc
gcgccggcgcgcctctatacctggtggagctaccgcgcgaaggactgggcggaatcggat
cgcggccgccgcctcgatcatatgtggatgacgaaggacgtggcgaacaaggcgaccagc
catcgcgtggtcgaacccgcgcgtagctggatcaagccgtccgaccatatccccatcatc
accgaattcgctttctga
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