Sphingomonas bisphenolicum: SBA_ch1_05810
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Entry
SBA_ch1_05810 CDS
T08354
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SBA_ch1_05810 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbin03400
]
SBA_ch1_05810 (mutS)
DNA repair and recombination proteins [BR:
sbin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SBA_ch1_05810 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
BBF68381
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Position
1:complement(614283..616928)
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AA seq
881 aa
AA seq
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MALSTDTAAPTPMMAQYLTLKRQAQDCLLFYRMGDFFELFFDDARQAAATLDIALTSRGE
HGGAPIPMCGVPVHSAEGYLARLIKGGHRVAIAEQTETPAQAKARGGKTLVARAIVRYVT
AGTLTEETLLDSRRDNMLVALAQVGGEEAGEIGIAAADISTGRFETMTCPLGDLPAELAR
LRPSETVVAEGSTLGVADCHPFDRAAFSSARADEALKRLFGVTTLDGFGQFGRAELAAMG
GLIAYLDHAGKGTLPFLAPPLRKASGGHVAIDAATRESLEIVATMAGARAGSLLGAIDRT
VTGAGARLLGQDLSAPLMDLATIEARLGLVQLFHDDATLRDQLRGALRALPDIGRALGRV
AVGRGSPRDLGQLRDGLGEARLLRERLGRLAEPPLLLARILPALDGHGALVDALARALVP
APPTETASGGYIADGYDPALDELRRMAGDGRRAIAALEAKYRAQTGISALKIRHNGVLGY
HVEVPARAADTLMQPDSGFTHRQTLAGVVRFNSIDLHEEAGRVAQAGAHALVAEAAHLEE
LIGAVLDRKSDIARAADALARLDVAASLAERAAEGGWQRPHFVGDDGAGPCLDIVGGRHP
VVEDALRKEGQPFVANDCRLSDGDRLWLVTGPNMGGKSTFLRQNALIVILAQAGGYVPAQ
AATLTLVDRLFSRVGASDNLAKGRSTFMVEMVETAAILSQATERSFVILDEVGRGTSTYD
GLALAWAVVEAVHEVNRCRCLFATHYHELTRLAETLSSLSLHHVRAREWKGDLVLLHELS
DGPADRSYGLAVARLAGLPQAVLKRAKDVLARLEAGKAKTGGIAAGLDDLPLFAAVAVQA
EAAPDPLLAAIDAIDADALSPREALDHIYRLKQLAAERRPD
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggccctttcgaccgatacagccgcccccacgccgatgatggcccaatatctgacgctc
aagcgccaagcgcaggattgcctgctcttctaccgcatgggcgatttcttcgaacttttc
ttcgacgacgccagacaagccgcggcgacgctggacatcgcgctgaccagccggggcgaa
catggcggcgcgccgatcccgatgtgcggcgtgccggtgcatagcgccgaggggtatctg
gcgcgcctcatcaagggcgggcatcgcgtcgccatcgccgagcagaccgagacgccggcg
caggccaaggcgcgcggcggcaagacattggtggcgcgggcgatcgtgcgctacgtcacc
gccggcacgctgaccgaggagactttgctcgacagccggcgcgacaatatgctggtcgcg
ctggcgcaggtcggcggggaggaggcgggcgagatcggcatcgccgccgccgacatttcc
acaggccggttcgagacgatgacctgcccgctgggcgacctgcccgctgaactggcacgg
ctgcggccgagcgagacggtggtagcggagggatcgacgctgggcgtggccgattgccat
cctttcgatcgcgccgccttttcgagcgcgcgagcggacgaggcgttgaagcgcctgttc
ggggtcacgaccctggacgggttcggccagttcggccgtgccgagctggccgcgatgggc
gggctgatcgcctatctcgatcatgcgggcaagggcaccctgcccttcctcgcgccgccc
ttgcgcaaggcgagcggcggccatgtggcgatcgacgcggcgacgcgcgaaagcctggag
atcgtggcgaccatggcgggcgcgcgggcgggcagcctgctgggcgcgatcgaccgcacc
gtgacgggcgcgggtgcgcggctgctggggcaggatctgtccgcgccgctgatggacctg
gcgacgatcgaggcgcggctggggctggtgcagctattccacgacgatgcgaccttgcgc
gatcagttgcgcggcgcgttgcgggcgctgccggacatcggtcgggcgctggggcgcgtg
gcggtgggacgtggcagcccacgcgatctgggccagttgcgcgatgggctcggcgaagcg
cgcttgctgcgcgagcggctggggcggctggccgagccgccgctgttgctggcgcggata
ttgccggcgctggacggccatggcgcgctggtcgatgcgctggcgcgcgcgctggtgccc
gcaccgcccaccgagacggcgagtggcggctatatcgccgacggctatgatcccgcactg
gacgaactgcgccgcatggcgggagacggccgccgcgcgatcgccgcgctggaggcgaaa
tatcgcgcgcagaccggtatatccgcgctgaagatccggcataacggcgtgctgggctat
catgtcgaggtgcccgcccgcgccgccgacacgctgatgcagcccgacagcggcttcacc
catcgccagacgctggccggggtggtgcggttcaattcgatcgacctgcacgaagaagcc
gggcgcgtggcgcaggcgggcgcccatgcgctggtggcggaagccgcgcatctggaggag
ctgatcggcgcggtgctggaccgcaagagcgacattgcgcgcgcggccgatgcgctggcc
cggctggacgtcgcggcgtcgctcgccgaacgggcggccgagggcggctggcagcggccg
catttcgtgggcgacgacggcgccggtccgtgcctggatatcgtcggcgggcggcatccg
gtggtggaagatgcactgcgcaaggaaggccagccctttgtcgcgaacgactgccgcctg
tccgacggcgaccggctatggctcgtcaccggcccgaacatgggtggcaagtcgaccttc
ctgcggcagaatgcgctgatcgtcatattggcgcaggcggggggctatgtcccggcgcag
gcggcgacgctgactttggtcgaccggctgttcagccgggtcggcgcgtcggacaatctg
gccaaggggcggtcgaccttcatggtcgagatggtcgagacggccgcgatcctgagccag
gcgaccgaacggagtttcgtcatcctggacgaggtcgggcgcggcacatccacctatgac
gggctggcgctggcctgggcggtggtggaggcggtgcatgaggtcaatcgctgtcgctgc
ctcttcgcgacgcactatcacgagttgacccggctggccgagacgttgtcgtcgctgtcg
ctgcatcatgtgcgggcgcgcgagtggaagggcgacctcgtcctgctgcacgaactgagc
gacggcccggccgatcgcagctatggcctggcggtggcgcgactggcggggttgccgcaa
gcggtgttgaagcgcgccaaggatgtgctggcgcggctggaagcgggcaaggcgaagacc
ggcgggatcgccgcggggctggacgacctgccgctgttcgcggcggtcgcggtgcaggcg
gaggccgcgcccgacccgcttctggcggcgatcgacgcgatcgacgccgacgccctgtca
ccgcgtgaggcgctcgatcacatatatcggttgaaacaactggctgccgagcggcggccc
gactag
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