Sphingomonas bisphenolicum: SBA_ch1_09450
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Entry
SBA_ch1_09450 CDS
T08354
Symbol
hupT_1
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sbin
Sphingomonas bisphenolicum
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbin03032
]
SBA_ch1_09450 (hupT_1)
03036 Chromosome and associated proteins [BR:
sbin03036
]
SBA_ch1_09450 (hupT_1)
03400 DNA repair and recombination proteins [BR:
sbin03400
]
SBA_ch1_09450 (hupT_1)
DNA replication proteins [BR:
sbin03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SBA_ch1_09450 (hupT_1)
Chromosome and associated proteins [BR:
sbin03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SBA_ch1_09450 (hupT_1)
DNA repair and recombination proteins [BR:
sbin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SBA_ch1_09450 (hupT_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BBF68745
LinkDB
All DBs
Position
1:974089..974364
Genome browser
AA seq
91 aa
AA seq
DB search
MNNSDLADKLAGENGITKADAKKLVDGLFAAIGDAAAQGEEISINGFGKFKVKDSPEREG
RNPATGEAMTIKASRKLSFTPAKAVKDKLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacagcgatcttgccgacaagctggccggcgaaaacgggatcaccaaggcggac
gcgaagaagctggtcgatggcctgttcgccgcgatcggcgatgctgcggcgcagggcgag
gaaatctcgatcaacggcttcggcaagttcaaggtgaaggacagcccggagcgtgagggc
cgtaaccccgcgaccggcgaagcgatgaccatcaaggcgtcgcgcaagctcagcttcacg
cccgccaaggcggtgaaggacaagctgaacggttaa
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