Sphingomonas bisphenolicum: SBA_ch1_10920
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Entry
SBA_ch1_10920 CDS
T08354
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sbin
Sphingomonas bisphenolicum
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbin01002
]
SBA_ch1_10920
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbin01011
]
SBA_ch1_10920
Peptidases and inhibitors [BR:
sbin01002
]
Cysteine peptidases
Family C82
SBA_ch1_10920
Peptidoglycan biosynthesis and degradation proteins [BR:
sbin01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SBA_ch1_10920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
BBF68892
LinkDB
All DBs
Position
1:complement(1106560..1108008)
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AA seq
482 aa
AA seq
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MNRPDLIRIPLLALLGVAAFPAVAQTPPPAVAPTLSVPTIQPVPVPPPPVPIPALSPAQE
AWANDWLKNGAAQGLMARQKASGPLSGDALVSALLDRAKALSTGRVDTADFLQIWALRPG
AFDPRPGLAKAVSEDRLSQWSTGLTPPWSGYDTLRKGLAKYEAIRDKGGWPTLTASSAPD
VVRARIALEDPAVTQNEKLVDVIQRAQRRYGLEPTGTLGTRTLAELNVGVDDRIAAIMAN
MERWRWMPRSLPVNRVQVNIAAAVLTVFEGDQPVTSMRAVTGSPTNQTPMLTSSIHSIVV
NPPWNVPMSIANRELFPKGRAALARQGYKIVKTPEGGERIVQPAGPGSALGRLKFDFNNP
FAVYLHDTPSRGKFSSYDRLASHGCIRLEKPVALAELMVAADPNLNGQIQTLIDEGKTQR
VSLPSQVAVYLLYWTAFAGNNGTVSFRADPYGWDKLLAQKIEASSRRVDPTAAPSPAIAS
KD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtcccgatctgatccgtatcccgctgctggcgctgcttggcgtcgccgcgttc
cccgccgtggcgcagaccccgccgcccgccgtggcgcccacattgtctgtgccgaccatc
cagcccgtcccggtccccccgccgcccgtgccgatcccggcgctgtccccggcgcaggag
gcctgggccaatgactggctgaagaatggcgcggcgcaagggctgatggcccggcagaag
gcgagcggcccgctgagcggcgatgcgctcgtgagcgccctgctcgatcgcgccaaggcg
ctcagcaccggccgcgtcgacaccgccgacttcctccagatctgggcgctgcgccccggc
gccttcgacccgcgccccggcctcgccaaggcggtgagcgaggatcggctgtcgcaatgg
tccaccggcctcaccccgccctggtcgggttatgacacgctgcgcaagggcctcgccaaa
tatgaggcgatccgcgacaagggcggctggccgacgctgaccgcgtccagcgcgcccgat
gtggtgcgcgcgcgcatcgcgctggaagatccggccgtcacccagaatgaaaaactggtg
gacgtgatccagcgcgcccagcgccgctatggtctcgaacccaccggcacgctcggcacg
cgcacattggccgaactcaatgtcggcgtcgatgaccgcatcgccgcgatcatggccaat
atggaacgctggcgctggatgccgcgcagcctgccggtcaatcgggtgcaggtgaacatc
gccgccgccgtgctgaccgtgttcgaaggcgaccagccggtcacctcgatgcgcgcggtc
accggcagcccgaccaaccagacgccgatgctgacctccagcatccattcgatcgtggtc
aatccgccctggaacgtgccgatgtcgatcgccaatcgcgaactgtttcccaaggggcgg
gcggcgctggcgcgacagggctacaagatcgtcaagacgcccgaaggcggcgaacgcatc
gtccagccggcaggccccggcagcgcgctcggccggttgaagttcgacttcaacaacccc
ttcgccgtctatctgcacgacaccccgtcgcggggcaaattctccagctatgaccggctg
gccagccatggctgcatccgcctggaaaagccggtggcgctggccgaactgatggtcgcg
gccgaccccaatctgaacggccagatccagacgctgatcgacgaaggcaagacccagcgc
gtatcgctgcccagccaggtggcggtctatctgctctactggacggctttcgccggcaat
aacggcacggtcagcttccgcgccgacccctatggctgggacaagctgctcgcgcagaag
atcgaggcgtccagccgccgcgtcgatcccaccgccgccccctctcccgctatcgcatcg
aaggactga
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