Sphingomonas bisphenolicum: SBA_ch1_13880
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Entry
SBA_ch1_13880 CDS
T08354
Name
(GenBank) HerA helicase-related ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sbin
Sphingomonas bisphenolicum
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbin03400
]
SBA_ch1_13880
DNA repair and recombination proteins [BR:
sbin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
SBA_ch1_13880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
FtsK_SpoIIIE
ResIII
AAA_22
TrwB_AAD_bind
AAA_30
Hydrolase
AAA_19
T2SSE
CbiA
AAA_25
AAA_7
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BBF69188
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Position
1:complement(1392958..1394589)
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AA seq
543 aa
AA seq
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MSDGIFIGLGAPDKDGGVPQTLNLRRANRHGLIAGATGTGKTVTLQGIAESFSALGVPVF
LADVKGDLAGISMAGSPTAKNADKLVARAAEVGIADYAYADNPAIFWDLYGEQGHPIRTT
VSEMGPLLLARLMGLNETQEGVLSIAFKYADEEGLLLLDLGDLQAMLAYCAENADTLSAR
YGNVTKASVGAIQRQLLQLESQGGDHFFGEPALDIHDMLQVDEKGRGYVNVLAADKLMQS
PKLYATFLLWLLSELFETLPEVGDPDKPKLVFFFDEAHLLFDDAPKALTDKIEQVVRLIR
SKGVGVYFVTQNPIDILEDVAGQLGNRVQHALRAFTPRDQRAIKAAAETFRINPDLNVET
AITELKVGEALVSLLQEDGSPGIVQRTLIAPPRSRLGPVEPKERAIIQSISPCAGKYDDA
VNRESAEEILAARGQASAAAAQASKAQAEADKAAAAQAKVEAKQREAELKEQARRDAAEA
REAAKPSAFDKAIQSATRAAGSSVGRQVANELGRAVFGGTSRKSSSGGIAGNLVRGILGS
LFK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacggtatcttcatcgggcttggcgcaccggacaaggacgggggcgtcccgcag
acattgaacctgcgccgcgccaatcgccatgggctgatcgccggggcgaccggcaccggc
aagaccgtcacgttgcagggcatcgccgagagtttttccgcgctgggcgtgccggtgttc
ctggccgatgtgaagggcgacctggccggcatatccatggccggatcgcccaccgccaaa
aatgccgacaagctggtggcgcgcgcggcggaagtcggcattgccgattatgcctatgcc
gacaatccggcgatcttctgggatctatatggcgagcaaggccatccgatccgcaccacc
gtcagcgagatggggccgctgctgctcgcgcggctgatgggcctcaacgagacgcaggaa
ggcgtgctgtccatcgccttcaaatatgccgatgaggaagggctgctgctgctcgatctg
ggcgatttgcaggcgatgctggcctattgcgcggagaatgccgatacgctgtcggcccgc
tacggcaatgttaccaaggccagcgtcggggcgatccagcggcaattgctgcaactggaa
agccagggcggcgaccatttcttcggtgaacccgcgctcgatatccatgacatgctgcaa
gtggacgagaaaggccgcggctatgtgaacgtgctggcggccgacaagctgatgcagagt
cccaagctctacgcgaccttcctgctgtggctgctgtccgaactgttcgagacgctgccc
gaagtgggcgacccggacaaacccaagctggtcttcttcttcgacgaggcgcatctgctg
ttcgacgacgcgcccaaggcgcttaccgacaagatcgaacaggtcgtgcggctgatccgg
tccaagggggtgggcgtctatttcgtcacgcagaacccgatcgacattctagaagatgtg
gccgggcaactgggcaaccgggtgcagcacgcgctgcgggccttcacgccccgcgaccag
cgcgcgatcaaggcggcggcggagaccttccgcatcaatcccgacctgaatgtcgagacg
gcgatcaccgaattgaaagtgggcgaggcgctggtgtcgctgctgcaggaggatggatcg
cccggcatcgtgcagcgcacgctgatagccccgccccgatcgcgcctcggcccggtcgaa
ccgaaagagcgcgcgatcatccagtcgatatcgccctgcgccggcaaatatgatgacgcg
gtgaaccgggaatcggccgaggaaatccttgccgcccgcgggcaggcgtcggctgcggcc
gcgcaggcgtccaaggcgcaggcggaagccgacaaggccgctgcggcgcaggccaaggtc
gaagcgaagcagcgcgaagcggaactgaaggagcaagcgcgacgcgacgcggccgaagcg
cgcgaggcggccaagcccagcgccttcgacaaggcgatccagtcggccacgcgggcggcg
ggatcgtcggtcgggcggcaggtcgccaacgaactgggccgcgcggtgttcgggggcacg
agccgcaagtcgtcgtcgggcgggatcgccggcaatctggtccgcggcatcttgggcagc
ctgttcaaatag
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