Sphingomonas bisphenolicum: SBA_ch1_14590
Help
Entry
SBA_ch1_14590 CDS
T08354
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin00300
Lysine biosynthesis
sbin00470
D-Amino acid metabolism
sbin01100
Metabolic pathways
sbin01110
Biosynthesis of secondary metabolites
sbin01120
Microbial metabolism in diverse environments
sbin01230
Biosynthesis of amino acids
Module
sbin_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SBA_ch1_14590 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SBA_ch1_14590 (dapF)
Enzymes [BR:
sbin01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SBA_ch1_14590 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BBF69259
UniProt:
A0ABM7FZV2
LinkDB
All DBs
Position
1:complement(1468178..1468978)
Genome browser
AA seq
266 aa
AA seq
DB search
MGRFSKMHGLGNDFVVIDARAQAIDMTEARARAIADRHAGIGCDQLILIGNAADADVSMQ
IFNADGSEVEACGNATRCVPLFVGRDVLIRTKAGLLDAKSVDGGASVDMGAPRFDWDAIP
LAYPMDTLTMGASWEELPAPAAVNVGNPHVIFFVDDLDGVNFDRLGPLIEHDPLFPARVN
VNFAQVVGDDHLRLVVWERGAGLTRACGTGACATAVAAIRRKLMTGPVTVSLPGGDLVID
WAPGGTIRMTGPATHVFDGEADWDRF
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcttctccaaaatgcatggcctcggcaacgacttcgtcgtcattgacgcgcgc
gcacaagcgatcgacatgacggaggcgcgcgcgcgcgccatcgccgaccgtcatgccggg
atcggctgcgaccagctcatcctcatcggcaatgccgctgacgccgacgtgtcgatgcag
atcttcaacgccgacggcagcgaagtcgaagcctgcggcaacgcgacccgctgcgtgccc
ctgtttgtcggccgcgatgtgctgatccgcaccaaagcgggcctgctcgacgccaagagc
gtggatggcggcgccagcgtcgatatgggcgcgccgcgcttcgactgggatgcgatcccg
ctcgcctatcccatggacacgctgaccatgggcgccagttgggaagagctgcccgccccc
gccgcggtcaatgtcggcaacccgcatgtcatcttcttcgtggacgatctggacggtgtg
aacttcgaccgtctcggcccgctgatcgagcatgatccgctgttcccggcccgcgtgaac
gtcaatttcgcgcaggtcgtgggcgacgatcatctccgtctggtggtatgggaacgcggc
gcggggctgacgcgcgcctgcggcacgggcgcctgcgccaccgccgtcgccgccatccgc
cgcaagctgatgacgggtccggtgacggttagtctgccgggcggcgatctggtgatcgac
tgggcaccgggcggcacgatccgcatgaccggccccgccacccacgtcttcgatggcgag
gctgactgggaccgcttctga
DBGET
integrated database retrieval system