Sphingomonas bisphenolicum: SBA_ch1_15920
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Entry
SBA_ch1_15920 CDS
T08354
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SBA_ch1_15920 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbin03400
]
SBA_ch1_15920 (priA)
Enzymes [BR:
sbin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SBA_ch1_15920 (priA)
DNA repair and recombination proteins [BR:
sbin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SBA_ch1_15920 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
AAA_22
zf_Rg
Zn_ribbon_LapB
Motif
Other DBs
NCBI-ProteinID:
BBF69392
UniProt:
A0ABM7G287
LinkDB
All DBs
Position
1:complement(1611514..1613685)
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AA seq
723 aa
AA seq
DB search
MSSRARVLILNAALGPLDYRVPHGMTVQPGSIVVAPLGPRQLVGVVWEEESFPDVETVGD
NRLRNLVEVVDAPPLPEPLRRLIEWTADYYLAPPAAVLRMALSSMAALEGARTVIEYRAT
GAAPDRMTEQRAQALERIGERQGLIRELAMIGGVSDAVIRGLIKQDIFEAVEVSVDTPFP
MPDPGHAQPILSEAQTSAATTMADAVRAHDFAPFLLDGVTGSGKTEVYFEAIAAAIRADR
QVLVLLPEIALTEPFLERFEKRFGTVPVNWHSGLRQSERRRAWRAIATGQAQVVVGARSA
LFLPYPNLGLIVVDEAHEASFKQEDGVHYHARDVAVMRGLIEKFPVVLASATPAIETRHQ
VELGRYAEIKLPSRYGGAEMPTIEGINLLTDPPERGRWIAPPLVKAIDEVMAKGEQSLLF
LNRRGYAPLTLCRHCGYRFQCPNCTAWMVEHRLTHRLACHHCGHVVPAPRRCPECKEEDS
LVACGPGVERIADEVKALWPQARTAIATSDTLSSPARAADFVKSVEAGDIDIIVGTQLVT
KGYHFPNLTLVGVIDADLGLEGGDLRAAERTFQQIVQVAGRAGRGEKPGKVFIQTRMPTS
EVIESLIEGDTERFYAVETENRRRANAPPFGRFAAIIISSENADEAAQTARLIGKSAPVI
EGMRVYGPAPAPLSVLRGRHRHRLLIHATRAVDIQAAIREWLGNLAWKSGTRVAVDVDPY
SFM
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgcgcgcccgtgtcctcattctcaacgccgccctggggccgctcgactatcgc
gtgccgcacggcatgaccgtgcagcccggcagcatcgtcgtcgcgccgctggggccgcgc
caactggtcggcgtagtgtgggaagaggaaagctttcccgatgtcgagaccgtgggcgac
aatcgactgcgcaatctggtcgaggtggtggacgccccgcccttgcccgaaccgctacgc
cggctgatcgaatggacggcggactattatctcgccccgcccgccgcggtgctgcgcatg
gcgctctcctccatggctgcgctggaaggggcgcggacggtgatcgagtatcgcgccacc
ggggctgcgcccgaccggatgaccgaacagcgcgcgcaggctctggaacggatcggcgag
cggcaggggctgatccgcgaactggcgatgatcggcggggtgagcgacgcggtgatccgc
ggcctcatcaagcaggacatattcgaagcggtggaggtgagcgtcgacacgcccttcccc
atgcccgatcccggccatgcgcaacccatattgtcggaggcgcagaccagcgccgcgacg
accatggcggacgcggtacgggcgcatgacttcgcgcccttcctgctcgacggcgtcacc
ggatcgggcaagacggaggtctatttcgaggcgattgccgccgcgatccgggccgaccgg
caggtgctggtgctgctgcccgagatcgcgctgaccgaaccctttctggaacggttcgag
aagcggttcggcacggtgccggtcaactggcatagcggcctgcgccagagcgagcggcgg
cgggcgtggcgcgccatcgcgacgggccaagcgcaggtggtggtaggcgcacggtccgcg
ctgttcctgccctatcccaatctcggcctgatcgtcgtggacgaagcgcatgaggccagc
ttcaagcaggaagacggcgtccattatcatgcccgcgacgtcgcggtgatgcgcggattg
atcgagaaatttccggtcgtcctggcatcggccaccccggcgatcgagacgcggcatcag
gtcgaactgggccgttatgcggagatcaagctgccatcgcgctatggcggggcggagatg
cccacgatcgaggggatcaacctgctgacagacccgcccgagcgcggccgctggatcgcg
ccgcctctggtcaaggcgatcgacgaggtgatggcgaagggcgagcagagcctgctcttc
ctcaaccggcgcggctatgcgccgctgaccttgtgccgccattgcggctatcggttccag
tgccccaattgcaccgcctggatggtcgagcatcggctgacgcaccggctcgcctgccat
cattgcggccacgtcgtccccgcgccgcgacgctgcccggaatgcaaggaggaggacagc
ctggtcgcctgcggccccggcgtcgagcgcatcgccgacgaggtgaaggcgctgtggccg
caggcgcgcaccgccatcgcaacgtccgatacgctgagttcccctgcccgcgccgcagat
ttcgtgaagtcggtggaggcaggcgacatcgacatcatcgtcggcacgcaattggtcacc
aagggctatcatttccccaacctgacgctggtcggtgtcatcgacgcggatctggggctg
gagggcggcgacctgcgggcggccgagcgcaccttccagcagatcgtgcaggtggccggc
cgcgccggacgcggcgagaagccggggaaggtgttcatccagacgcggatgccgaccagc
gaggtcatcgaatcgctgatcgagggggataccgagcgcttctacgcggtcgagacggag
aacaggcggcgcgccaacgccccgcccttcggccgcttcgccgcgatcatcatttccagc
gagaatgccgacgaggcggcgcagaccgcacggctgatcggcaagtcggcgccggtgatc
gaagggatgcgcgtctatggtcctgcgccagcgccactgtccgtgctacgcggccgccat
cgtcatcgcctgctgatccacgcgacgcgcgcagtggacattcaggcggcgatccgcgaa
tggctgggcaatctggcctggaaatcaggcaccagagtagcggtggacgtcgatccctac
agcttcatgtaa
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