Sphingomonas bisphenolicum: SBA_ch1_15980
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Entry
SBA_ch1_15980 CDS
T08354
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sbin
Sphingomonas bisphenolicum
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbin03016
]
SBA_ch1_15980 (truA)
Enzymes [BR:
sbin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SBA_ch1_15980 (truA)
Transfer RNA biogenesis [BR:
sbin03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SBA_ch1_15980 (truA)
Prokaryotic type
SBA_ch1_15980 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BBF69398
LinkDB
All DBs
Position
1:complement(1617616..1618371)
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AA seq
251 aa
AA seq
DB search
MTRFAFTVEFDGRPFMGWQRQAHGPSVQQTIEDAIFAVTGERAVIHAAGRTDAGVHGLAM
RAHAEIDKVIAPFRLMEAINARMRPHPVAILACQPVADDWHARFSCIGRSYVYRIANRRA
PLTFEQGLAWRVIQPLDVPAMQDAAQILVGRHDFTTFRSAHCQAQSPVKSLDRLDVERDG
DRIAIHAAARSFLHHQVRSMVGCLAMVGMGRWSAGDLRAALEARDRAALGLNAPPDGLYF
VQATYPAAAVR
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttcgccttcaccgtcgaatttgacggccgccccttcatgggctggcagcgc
caggcccatggccccagcgtgcagcagacgatcgaggacgcgatcttcgccgtgacgggc
gagcgcgccgtgatccatgccgccggtcgcaccgatgcgggcgtccacggcctggccatg
cgcgcccatgcggagatcgacaaggtcatcgcgccctttcggctgatggaggcgatcaac
gccaggatgcggccccatccggtcgccatcctggcgtgccagccggtcgccgacgactgg
catgcgcgcttttcctgtatcggtcggtcctatgtctatcggatcgccaaccgccgtgcg
ccgctgaccttcgagcaaggactggcgtggcgggtgatccagccgctcgatgtgccggcg
atgcaggatgcagcgcagatactggtggggcggcacgacttcaccacattccggtcggcc
cattgccaggcgcaaagcccggtcaagtcgctcgaccggctggatgtcgaacgcgacggc
gaccggatcgcgatccacgcggcggcgcgctccttccttcatcaccaggtgcgatcgatg
gtcgggtgcctggcgatggtcggcatggggcgatggagtgcaggggatctgcgcgccgca
ctggaggccagggatcgggcggcgctgggcctcaacgccccgccggacggactatatttc
gtgcaggcgacctatcccgccgcggccgtcagatga
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