Sphingomonas bisphenolicum: SBA_ch1_17670
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Entry
SBA_ch1_17670 CDS
T08354
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sbin
Sphingomonas bisphenolicum
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbin03016
]
SBA_ch1_17670 (truB)
Enzymes [BR:
sbin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SBA_ch1_17670 (truB)
Transfer RNA biogenesis [BR:
sbin03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SBA_ch1_17670 (truB)
Prokaryotic type
SBA_ch1_17670 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Peptidase_S21
Motif
Other DBs
NCBI-ProteinID:
BBF69567
UniProt:
A0ABM7G4P1
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All DBs
Position
1:1778223..1779269
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AA seq
348 aa
AA seq
DB search
MHGWIILDKPHGLGSTQAVSAVKRALRVQRELLGGTEKWKVGHGGTLDPLATGVLPIAIG
EATKLAGRMLDSDKIYDFTVAFGVQTDTLDLEGTAIAESDVRPTLAQVEAILPRFTGPIE
QAPPAYSAILIDGQRAYDLARKGEAVEMKLRSVTIHALHISSPQGGEDSAACPQGGVAQL
GEGEANPSPTSARQQAAKPPYPLPHGERISQITLAAHVSKGTYIRSLARDIALALGTVGH
VTMLRRVKAGPFTLETAISLDKLDEAAKGGGIGGLMLPLTAGLDDIPALPVSPDQAIALR
QGKILTGIAAATGLHLATDGIIPVALVEMQDGDIRVVRGFNLMSREDD
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcatggctggatcattctcgacaaaccgcatggcctcggctccacccaggcggtcagc
gcggtcaagcgcgcgctgcgcgtgcagcgggagctgctgggcgggacggaaaagtggaag
gtcggccatggcggcaccctcgatccgctggcgaccggggtgttgccgatcgcgatcggg
gaggcgacgaagctggccgggcggatgctcgacagcgacaaaatctatgattttaccgtc
gcgttcggtgtccagaccgacacgctcgacctggaggggacggcgattgcggagagcgac
gtccgtccgacgctggcgcaggtggaggcgatcctgccccgcttcaccggcccgatcgaa
caggcgccgcccgcctatagcgccatcctgatcgacggccagcgcgcttatgacctcgcc
cgcaagggggaagcggtggagatgaagctgcggtcggtgacgatccacgcgctgcacata
tcctcgccccaggggggagaggatagcgcagcttgcccgcaaggcggggtagcgcagcta
ggagagggggaagcaaacccctctccaacttcggctaggcagcaagctgccaagcctccc
tatcctctcccccacggggagaggatttcccagatcaccctggccgcccatgtctccaaa
ggcacctatatccgctcgcttgcccgcgacatcgcgctggcgctcggcacggtcggccat
gtcaccatgctgcgccgcgtgaaggccgggccgttcacgctggaaaccgcgatatcgctg
gacaaattggacgaagctgctaagggcggcggcatcggtgggctcatgctgccgttgacg
gcggggctggacgacatcccggctctccccgtctctcccgatcaggccatcgctctccgc
caggggaagatactgaccgggatcgccgctgccactggccttcatctggcaaccgacggg
attatccctgttgcgctggtcgaaatgcaggatggtgacatccgtgtggtgcgcggtttc
aacctgatgtcgagggaagacgattag
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