Sphingomonas bisphenolicum: SBA_ch1_17800
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Entry
SBA_ch1_17800 CDS
T08354
Symbol
groL2
Name
(GenBank) 60 kDa chaperonin 2
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SBA_ch1_17800 (groL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbin03019
]
SBA_ch1_17800 (groL2)
03110 Chaperones and folding catalysts [BR:
sbin03110
]
SBA_ch1_17800 (groL2)
03029 Mitochondrial biogenesis [BR:
sbin03029
]
SBA_ch1_17800 (groL2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbin04147
]
SBA_ch1_17800 (groL2)
Enzymes [BR:
sbin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SBA_ch1_17800 (groL2)
Messenger RNA biogenesis [BR:
sbin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SBA_ch1_17800 (groL2)
Chaperones and folding catalysts [BR:
sbin03110
]
Heat shock proteins
HSP60 / Chaperonin
SBA_ch1_17800 (groL2)
Mitochondrial biogenesis [BR:
sbin03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SBA_ch1_17800 (groL2)
Exosome [BR:
sbin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SBA_ch1_17800 (groL2)
Exosomal proteins of other body fluids (saliva and urine)
SBA_ch1_17800 (groL2)
Exosomal proteins of breast cancer cells
SBA_ch1_17800 (groL2)
Exosomal proteins of colorectal cancer cells
SBA_ch1_17800 (groL2)
Exosomal proteins of bladder cancer cells
SBA_ch1_17800 (groL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BBF69580
UniProt:
A0ABN5WC15
LinkDB
All DBs
Position
1:1792147..1793793
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFSRDARERILRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELKDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGI
DLAVIKVVEDIKARSKPVSGSAEVAQVGIISANGDREVGEKIAEAMEKVGKEGVITVEEA
KGLDFELDVVEGMQFDRGYLSPYFITNPEKMAVELADPYILIHEKKLSNLQSILPILEAV
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAVLTKGEV
ISEDLGIKLESVTLGMLGTAKRVTIDKDNTVIVDGAGDHDSIKGRTEQIRQQIEHTSSDY
DREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKALNGLTGVNDDQTRGIDIVRKSLTALVRQIAQNAGHDGAVVSGKLLDQDDTSFGFN
ASTDVYENLVAAGVIDPTKVVRTALQNAASVAGLLITTEAAVSELPADDKAPMGMPGGGM
GGMGGMDF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaaggacgtaaagttttcgcgtgacgctcgtgagcgcatcctgcgcggcgtc
gacatcctggccgacgcggtcaaggtgaccctggggccgaagggccgcaacgtcgtcatc
gacaagagcttcggtgcgccccgcatcaccaaggacggcgtcagcgtcgccaaggaaatc
gaactgaaggacaagttcgagaatatgggcgcccagatggtccgcgaagtcgcttcgaag
accaacgacatcgccggtgacggcaccaccaccgcgaccgtcctggcccaggccatcgtg
cgcgaaggcatgaagtcggttgccgccggcatgaatccgatggacctgaagcgcggcatc
gacctcgccgtcatcaaggtcgtcgaggacatcaaggcgcgttcgaagccggtttcgggt
tcggccgaagtcgcccaggtcggcatcatctccgccaatggtgaccgtgaagtcggcgaa
aagatcgccgaagccatggaaaaggtcggcaaggaaggcgtcatcaccgtggaagaggcc
aagggtctcgacttcgaactggacgtcgtggaaggcatgcagttcgaccgcggctacctg
tcgccctacttcatcaccaacccggaaaagatggctgtcgagctggctgatccgtacatc
ctgatccacgagaagaagctgtcgaacctgcagtcgatccttccgatcctggaagccgtc
gtgcagtcgggccgtccgctgctgatcatcgcggaagacattgaaggcgaagcgctggcg
accctggtcgtcaacaagctgcgtggcggcctgaaggttgctgctgtcaaggcgcctggc
ttcggcgatcgtcgcaaggcgatgctggaagacatcgccgtcctgaccaagggcgaagtg
atctcggaagacctgggcatcaagctcgagtcggtcacgctgggcatgctcggcaccgcc
aagcgcgtcaccatcgacaaggacaacaccgtcatcgtcgatggcgctggcgaccatgac
tcgatcaagggccgcaccgagcagatccgtcagcagatcgagcacaccagctcggactat
gaccgtgaaaagctgcaggaacgtctggccaagctggctggcggcgtggccgtcatcaag
gtcggcggcgcgacggaagtcgaagtcaaggagcgcaaggatcgcgtcgacgacgctctc
catgcaacccgcgcggcggtcgaagaaggcatcgtccccggtggcggtacggccctgctg
tacgcgaccaaggctctcaatggcctgaccggcgtcaatgatgaccagacccgcggcatc
gacatcgttcgcaagtcgctgaccgctctggttcgccagatcgcccagaatgcgggccat
gatggcgctgtcgtgtcgggcaagctgctcgaccaggacgacacctcgttcggcttcaac
gcgtcgaccgacgtgtatgaaaacctggttgctgccggcgtgatcgacccgaccaaggtc
gtccgcaccgcgctgcagaacgctgcctcggtggctggcctgctcatcacgacggaagcc
gccgtgtccgagctgcccgccgacgacaaggccccgatgggcatgcccggcggcggcatg
ggcggcatgggcggcatggacttctaa
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