Sphingomonas bisphenolicum: SBA_ch1_20540
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Entry
SBA_ch1_20540 CDS
T08354
Name
(GenBank) membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sbin
Sphingomonas bisphenolicum
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbin02000
]
SBA_ch1_20540
Transporters [BR:
sbin02000
]
Other transporters
Pores ion channels [TC:
1
]
SBA_ch1_20540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Surface_Ag_2
OmpA_membrane
Opacity
Porin_4
UBA_At5g58720
Motif
Other DBs
NCBI-ProteinID:
BBF69854
UniProt:
A0ABN5WC38
LinkDB
All DBs
Position
1:2082205..2083257
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AA seq
350 aa
AA seq
DB search
MRKLALAAALATTVLATPAMARDNSWYVGVDAGVLLVEDQDIESSTAVTTADYHKGYDFD
ANIGYDFGGFRLEAEAAYKRAKVDLDKSGFGGAASALSFMLNGLLDFGPDDGLQGFVGGG
VGVSRGKLATDLVNDSDTGFAWQAIAGVRYPVTNNVDVSLKYRFFNQDDIKVIPAYTTGL
AVAGDTINTKLRTHSLLLGLTYNFGGEPAAPPPPPPPPPPPPPPPPPPPPPVAECNPGPY
IVFFEWDKSDITPDAATILDNAVSAYSSCGSAQVMLAGHADRSGAASYNVGLSQRRADSV
KAYLASKGIPDGVITTQAFGESKPRVDTADGVREVQNRRVEISYGPGSGM
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagcttgccctcgcggctgcgcttgcgaccaccgtcctggccaccccggccatg
gcgcgtgacaatagctggtatgtcggcgtcgatgccggcgtcctgctcgtcgaagaccag
gatattgaatcgtcgaccgccgtcaccaccgccgattatcataagggttatgatttcgac
gccaacatcggctatgatttcggcggtttccgtctggaagccgaagccgcttacaagcgc
gccaaggtcgatctggacaagagcggcttcggcggcgcagcctcggctctctcgttcatg
ctgaacggcttgctcgacttcggtcccgatgatggcctgcagggcttcgtcggcggcggt
gtcggcgtttcgcgcggcaagctggcgaccgatctggtcaacgacagcgacaccggtttc
gcctggcaggcgatcgcgggcgttcgttacccggtcaccaacaatgtcgacgtttcgctg
aagtatcgtttcttcaatcaggacgatatcaaggtcatcccggcatacaccacgggcctg
gccgttgcaggcgacaccatcaacaccaagctgcgtacgcacagcctgttgctgggtctg
acctacaacttcggcggcgaaccggctgctccgccgccgcccccgccgcccccgcccccg
ccgcctcctccgcccccgccgcccccgccgccggttgcggaatgcaaccctggcccgtac
atcgtgttcttcgaatgggacaagtcggacatcacgcctgacgccgccaccattctggac
aacgcggtttcggcctacagcagctgcggcagcgctcaggtcatgctggccggtcacgct
gaccgttcgggtgccgcttcctacaacgtcggcctctcgcagcgccgcgctgactcggtc
aaggcctatctggcctcgaagggtatccctgatggtgtcatcaccacccaggccttcggt
gaatcgaagccgcgcgtcgacaccgcggacggcgttcgcgaagtccagaaccgtcgcgtg
gaaatcagctacggtccgggttcgggcatgtaa
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