Sphingomonas bisphenolicum: SBA_ch1_20670
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Entry
SBA_ch1_20670 CDS
T08354
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin00061
Fatty acid biosynthesis
sbin00071
Fatty acid degradation
sbin01100
Metabolic pathways
sbin01212
Fatty acid metabolism
sbin02024
Quorum sensing
sbin04146
Peroxisome
Module
sbin_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SBA_ch1_20670
00071 Fatty acid degradation
SBA_ch1_20670
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SBA_ch1_20670
09145 Cellular community - prokaryotes
02024 Quorum sensing
SBA_ch1_20670
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbin01004
]
SBA_ch1_20670
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbin04147
]
SBA_ch1_20670
Enzymes [BR:
sbin01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SBA_ch1_20670
Lipid biosynthesis proteins [BR:
sbin01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SBA_ch1_20670
Exosome [BR:
sbin04147
]
Exosomal proteins
Exosomal proteins of breast milk
SBA_ch1_20670
Exosomal proteins of breast cancer cells
SBA_ch1_20670
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Ortholog
Paralog
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Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BBF69867
UniProt:
A0ABM7G5E4
LinkDB
All DBs
Position
1:2095875..2097572
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AA seq
565 aa
AA seq
DB search
MEKTWRERYQHPTAWDQTFPPLSMGEMVTHSVKAHPDAPMIDFMGRHFSYGAMLEQIRRI
ACGLQGMGVKKGDRVGLYLPNTPHYVAAYYGALMAGAIVVNFSPLYTAAELEHQVADSGT
KILFSLSAKALLPTALEVLEHSELETLVVGSVAEMLSPVKSLLFRWFKASESTPLPHDPR
VMRYDQLIANAGGCTVPEIDPVNDVALLQYTGGTTGTPKGAMLTHQNLTANARQAQAIDP
HANEPDRIIAVLPFFHVFANTCTLNRTVVNGGEMVMLPRFDAAQVLAAVQRVKATSLPGV
PTMFQALLDHPAIRNIDFSSLRACISGGAPLALELKQKFEAATGARLIEGYGLTETSPIV
CTNPYEGLNKSGTVGQPVPGTRVKLVDREDPTRPPPEGEPGELLFAGPQIMKGYWNRPDA
DAEVFVGEYVRTGDVGLIDEDGYVKIVDRLKDMIAVGGFKVFPSQVESVLYHHPAVKEAL
VIGIPDHYRGEQPKAFVTLNEGAEIDGAALKDWLNPQLGKHERVCEVEVRLNLPKTLVGK
LSRKELVAEERAKADAARAEAGTAA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacctggagagagcggtaccagcacccgacggcctgggaccagacattccca
ccgctgtcgatgggcgagatggtgactcatagcgttaaggcgcatcccgatgccccgatg
atcgacttcatggggcggcatttcagctatggcgcgatgctggaacagattcgccgcatc
gcctgtggcttgcagggcatgggcgtgaagaagggagaccgggtcggcctctatctgccc
aacaccccgcattatgtcgcggcctattatggcgcgctgatggccggcgcgatcgtcgtc
aacttctcccctctctataccgccgccgaactggagcatcaggttgccgatagcggcacg
aaaatccttttctccctgtcggccaaggcgttgttgcccaccgcgctggaggtgttggag
catagcgaactggaaacgctggtcgtcggttcggtcgcggagatgctgtcgccggtcaag
tcgctgctgttccgctggttcaaggccagcgagtccacgcccttgccgcacgatccgcgg
gtgatgcgctatgaccagttgatcgccaatgcggggggctgcaccgtgccggaaatcgac
ccggtcaatgacgtggcgctgttgcaatataccggcgggacgaccggtacgcccaagggc
gcgatgctcacccaccagaacctcaccgccaatgcgcggcaggcgcaggcgatcgatccg
catgcgaacgagccggaccggatcatcgcggtgctgcccttcttccatgtcttcgccaat
acctgcacgctcaaccggacggtggtgaatggcggcgagatggtcatgctgccacgcttc
gacgcggcgcaggtgctggcggcggtgcagcgggtcaaggcgacgtcgctgcccggcgtg
ccgaccatgttccaggcgctgctggaccatcccgccatccgcaatatcgatttttcctcg
ctgcgcgcctgcatttcgggcggcgcgccgctggcgctggagctgaagcagaaattcgag
gcggcgaccggcgcgcgtctgatcgaaggctacggcctgaccgaaaccagcccgatcgtc
tgcaccaatccctatgaggggctgaacaagagcgggacggtaggccagccggtgccgggg
acacgggtcaagctggtcgatcgcgaagacccgacccgcccgccgcccgaaggcgagccg
ggcgaactgcttttcgccgggccgcagatcatgaagggctattggaaccggcccgacgcc
gatgccgaagtgtttgtcggcgaatatgtccgcaccggggatgtcggcctgatcgacgag
gacggctatgtgaagatcgtggaccggctcaaggacatgatcgcggtcggtggcttcaag
gtgtttcccagccaggtggaatcggttctctaccaccatcccgcggtcaaggaggcgctg
gtgatcggcatccccgaccattatcgcggcgagcagcccaaggcgttcgtaaccctgaac
gaaggcgcggagatcgacggcgcggcgctcaaggactggctcaacccccaactgggcaag
catgagcgggtgtgcgaggtagaggtgcgcttgaacctgcccaagacgctggtcggcaag
ctgtcgcgcaaggaactggtggccgaagagcgggccaaggcggatgcggcacgggcggag
gctggaaccgcggcctga
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