Sphingomonas bisphenolicum: SBA_ch1_21500
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Entry
SBA_ch1_21500 CDS
T08354
Symbol
lcfB
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin00061
Fatty acid biosynthesis
sbin00071
Fatty acid degradation
sbin01100
Metabolic pathways
sbin01212
Fatty acid metabolism
sbin02024
Quorum sensing
sbin04146
Peroxisome
Module
sbin_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SBA_ch1_21500 (lcfB)
00071 Fatty acid degradation
SBA_ch1_21500 (lcfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SBA_ch1_21500 (lcfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SBA_ch1_21500 (lcfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbin01004
]
SBA_ch1_21500 (lcfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbin04147
]
SBA_ch1_21500 (lcfB)
Enzymes [BR:
sbin01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SBA_ch1_21500 (lcfB)
Lipid biosynthesis proteins [BR:
sbin01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SBA_ch1_21500 (lcfB)
Exosome [BR:
sbin04147
]
Exosomal proteins
Exosomal proteins of breast milk
SBA_ch1_21500 (lcfB)
Exosomal proteins of breast cancer cells
SBA_ch1_21500 (lcfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BBF69950
LinkDB
All DBs
Position
1:complement(2190909..2192435)
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AA seq
508 aa
AA seq
DB search
MANRAARLFHLAAESPDRTALLFEGATHSFARLAQGVQAMAGGLAALGIGHGDHVGLLLR
ASPDFILVQQALFALGAVVTPINILYRAGEIHHAVACCALDHIVTARDLADALDADMGCA
MILLDAPADGANSRSLPLAIEQASPLPAPVPLQPEDMAMLLLTSATTGKAKGVMLSAGNL
AANYDSTPGWLGLDGDSVILCALPLYNTFGLNQCINAMLVTGCTLVLHARFDAGACIDAI
AAHRCTFLPAVPTMLQKILDHPSANRDSLGSLRTIMTGGAPVPSALLQRLLAVAPNVRLL
TGYGLTEATALVTLTQVRLGDHGGMERERTIGRVLDGMDLAIVDDTGAPCPVGASGEIIV
RGPNIMAGYYRAPLDSAMALRDGWLRTGDIGHLDADGYAYIVDRKKDVIIRGGQNIYPAD
IEEILYQIPGVAEAAVIAREDTMLGEVPVAFVALQPGRRPTPDQMLAHCRTHLAAYKVPA
AITLLDELPKGPTGKILRRALRAQPVAG
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcgcgccgcccgcctctttcacctagccgccgaatcgcccgaccggacggcg
ctgctcttcgagggcgcgacgcacagcttcgccaggctggcgcagggcgtgcaggcgatg
gccggcggccttgccgcgctgggtatcggccatggcgaccatgtcgggctgctgctgcgc
gcctcgcccgacttcattctggtccagcaggcattgttcgcgctcggcgcggtggtgacg
ccgatcaacatcctctatcgcgcgggcgaaatccatcatgccgtcgcctgctgcgcgctc
gatcatatcgtcactgcccgcgacctcgccgatgcgctggacgcggacatgggttgcgcg
atgatcttgctggacgcgccagcggatggcgcgaacagccggtcgctgccgctcgcgatc
gagcaggcctcgccccttcccgcgcccgtcccgctccagccggaggacatggccatgctc
ctcctcaccagcgccaccaccggcaaggccaagggcgtcatgctgtccgccggcaatctc
gccgccaattatgacagcacgccgggctggctggggctggacggcgacagcgtcatcctg
tgcgccctgccgctctacaacacgttcggcctcaaccagtgcatcaacgcgatgctggtg
accggctgcacgctggtcctccacgcgcgcttcgacgcaggcgcctgcatcgacgccatc
gccgcgcatcgctgcaccttcctgcccgccgtcccgacgatgctgcaaaaaatcctcgat
catccttccgccaaccgtgattcgctcggttcgctccgcacgatcatgaccggcggcgcg
ccagtgccctccgccctcctccagcggctgctcgccgtggcccccaacgtccggctgctc
accggatacggcctcaccgaagcgacggcactcgtcaccctgacgcaggtccggctcggc
gatcatggcgggatggagcgggaacgcaccatcggccgcgtgctggacggcatggacctc
gccatcgtcgacgatactggcgcgccttgcccggtcggcgccagcggagaaatcatcgtg
cgcggaccgaacatcatggcgggctattatcgcgcgccgctcgacagtgcgatggcgctg
cgcgacggctggctgcggaccggcgacatcggccatctcgacgcggacggctatgcctat
atcgtcgatcgcaagaaggacgtcatcatccgcggcggccagaatatctaccccgccgac
atagaggaaattctctaccagatacccggcgtggcggaagccgcggtgatcgcccgcgaa
gacacgatgctgggcgaagttccggtcgccttcgtcgcgctccagcccggccgtcgacct
acccccgatcagatgctcgcgcattgccgcacgcatctggccgcttacaaggtgcccgcc
gcgatcaccctgttggacgagttgcccaaggggccgaccggcaaaatcctgcgccgcgcg
ttgcgcgcccagccggtcgccggctga
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