Sphingomonas bisphenolicum: SBA_ch1_22330
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Entry
SBA_ch1_22330 CDS
T08354
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
sbin
Sphingomonas bisphenolicum
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbin02000
]
SBA_ch1_22330
Transporters [BR:
sbin02000
]
Other transporters
Pores ion channels [TC:
1
]
SBA_ch1_22330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
LysM3_LYK4_5
DUF6278
Motif
Other DBs
NCBI-ProteinID:
BBF70033
UniProt:
A0ABN5WJE0
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All DBs
Position
1:2277403..2279979
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AA seq
858 aa
AA seq
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MKNTAYYLASSALTVVALAVSPASAQAVGIPDDAAADAGTIIVTGVRGAPRTVAESPAPI
DVVSADKLQATGSAEFGEALSKLLPSLNFGSTHAGVFSIGRPVTNRGLAPAYTLVLVNGK
RRHNGAFLSNSTADTSGANPVDIDLIPTSGIDRIEVLKDSAAAQYGTDAIAGVINIQLAQ
KEGLSGDFTYGTLYSANGKPDSWKGTIRYGTKIGDDGGFLTVSGDIRKRGGAWWNLAATD
TNLYGLPAGRTIDQVVASSGLTREQVEANIADANARNAAWNRDGAHNGDPQIKAFNLSYN
AELPVTDNATLYSFGTYGERDAQIGNNFRRPNSTANFTALFPDGYYPLNNIDETDFQFVG
GLRGTLAGWDYDLSSSFGRNASRQFSKLSIRPSLGPDSPTTWPNLANFEFRQWTHNVDLH
REFDIGFAKPLQVSIGGEYRLDRFRTFAGDPLAYEPATYTFQPGDQQYDWNVGRVASPVV
QGAIVLSPDDEADISRKVYAGYVDLGIYPIDAWYIGAAVRAEHYSDGSGSPIGLKLNSRY
EFSPALAIRGTVGTGFRAPSLTQIGYAQTDGRTSSFFNAETGQTELRPTVAKLVTADSNV
GKLLGAKPLKAEKTWNAGLGIVFTPLPALSITLDGYYIKIKDRIERTGRLFGTGISAILA
ANGLSDIEQAEYFINAADTETKGFDLVADYSTGLGDFGKLGVTFAFNYSRTKVTDVVATP
SQLFGANGASLLGAGSVFFGGDKIGELEVLQPHSKLVSTLNWSKGIFGLSITNTRYGKYT
QRTAAGDDRYFGAKIITDLSVSAKVTDFATLSVGATNLFDVRPEKNGPGNPQTGQGYYGP
SPFNPAGGYYYGRIALAF
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaccgcttactatctcgcatcctcggcgctcacggttgtcgcactcgccgtc
tcaccggcatcggcgcaggctgttggcattcctgacgatgcagcggccgacgccggcacc
atcatcgtcaccggcgtccgcggcgcgccccggaccgtggccgaaagcccggcaccgatc
gacgtggtcagcgccgacaagctgcaggcgaccggctcggccgaatttggcgaggcgctg
tccaagctgctgccgtcgctcaatttcggttcgacccatgccggcgtcttctcgatcggc
cgccccgtgacgaaccgcggtctggcgccggcctacacgctggtgctggtcaatggaaag
cgtcgccacaacggggccttcctcagcaattcgaccgccgacacgtccggtgcgaacccg
gtcgatatcgacctgatcccgaccagcggcattgaccggatcgaagtcctcaaggacagc
gccgccgcccaatatggcaccgacgcgatcgccggcgtcatcaatatccaactggcgcaa
aaggaagggctgagcggcgacttcacctatggcacgctctattcggccaatggcaagccg
gatagctggaagggcacgatccgctacggcacgaagatcggcgacgatgggggcttcctg
accgtcagcggcgacatccgcaagcgcggcggcgcctggtggaacctggctgcgactgac
accaatctctacggcctgcccgccggccgcaccatcgatcaggtggtggccagcagcggc
ctgacccgcgaacaggtcgaggcgaacatcgccgacgccaatgcgcgcaacgccgcctgg
aaccgcgacggcgcccataatggcgacccgcagatcaaggcgttcaacctcagctacaat
gccgaactgccggtcacggacaatgccaccctctacagtttcggcacctatggcgagcgc
gacgcgcagatcggcaataatttccgtcgccccaacagcaccgccaatttcaccgcgctc
ttcccggacggctattatccgctcaacaatatcgatgagacggacttccagttcgtcggc
ggcctgcgtggtacgctggcgggctgggattatgatctctcctcctccttcggccgcaac
gccagccgccagttttcgaagctctccatccgtccgtcgctcggcccggacagcccgacc
acctggcccaatctcgccaatttcgaatttcgccaatggacccataatgtcgatctgcat
cgcgagttcgacatcggtttcgccaagccgctgcaagtctcgatcggcggcgaatatcgt
ctcgaccgcttccgcaccttcgccggcgatccgctcgcctatgaaccggcaacctacacg
ttccaacccggtgaccagcaatatgactggaatgtcggccgcgttgcgtcgccagtggtg
cagggcgcgatcgtcctttctcccgatgatgaggccgacatcagccgcaaagtctatgcc
ggctatgtcgacctcggcatctatccgatcgacgcctggtatatcggcgcagccgtccgc
gccgaacattatagcgacgggtcgggcagcccgatcggcctgaaactcaacagccgctac
gaattcagccccgcgctcgccattcgcggtacggtgggtacagggttccgcgcgccatcg
ctgacccagatcggctatgcccagacggacggccgtacgtcgtccttcttcaatgcggag
acgggccagaccgaattgcgcccgaccgtcgccaagctggtgacggcggacagcaatgtc
ggcaagctgctgggcgccaagccgctcaaggccgaaaagacctggaatgcgggcctcggc
atcgtcttcacgccattgccggcgctatcgatcacgctcgatggctattatatcaagatc
aaggaccggatcgagcgtactggccgcctgttcggcaccggcatctccgccatcctggct
gccaatggcctgtcggacattgagcaggccgaatatttcatcaacgccgccgataccgaa
accaagggcttcgatcttgtcgccgactattcgaccggccttggcgatttcggcaagctg
ggcgtcaccttcgccttcaactatagcaggaccaaggtcaccgacgtcgtcgccaccccg
tcgcaactgttcggcgccaatggcgcgtcgctgctcggcgccggctccgtctttttcggc
ggcgacaagatcggcgaactggaagtgctccagccgcacagcaagctggtcagcacgctg
aactggagcaagggcattttcggcctgagcatcaccaacacccgctacggcaaatatacg
cagcgcacggcggcgggcgacgatcgctatttcggcgcgaagatcatcaccgacttgagc
gtcagcgcgaaggtgacggacttcgctaccctgtcggtcggcgccacgaacctgttcgac
gtccgccccgaaaagaacgggccgggcaatccccagaccgggcagggctattatggccct
tcgcccttcaaccccgcaggcggttattattatgggcgcatcgctcttgctttctga
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