Sphingomonas bisphenolicum: SBA_ch1_24850
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Entry
SBA_ch1_24850 CDS
T08354
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sbin
Sphingomonas bisphenolicum
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbin03019
]
SBA_ch1_24850 (rnc)
03009 Ribosome biogenesis [BR:
sbin03009
]
SBA_ch1_24850 (rnc)
03036 Chromosome and associated proteins [BR:
sbin03036
]
SBA_ch1_24850 (rnc)
Enzymes [BR:
sbin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SBA_ch1_24850 (rnc)
Messenger RNA biogenesis [BR:
sbin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SBA_ch1_24850 (rnc)
Ribosome biogenesis [BR:
sbin03009
]
Eukaryotic type
90S particles
RNase
SBA_ch1_24850 (rnc)
Prokaryotic type
rRNA processing factors
SBA_ch1_24850 (rnc)
Chromosome and associated proteins [BR:
sbin03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SBA_ch1_24850 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BBF70285
LinkDB
All DBs
Position
1:2527407..2528090
Genome browser
AA seq
227 aa
AA seq
DB search
MKPTTHGPDTAGWLKDLIGRVPINPARFDQALTHGSAKAVNYERLEFLGDRILGLLIAEW
LFERFTDEPEGKLSRRFNALVSGETCAEVARTAGVPIHLVLGKQARDDGAADSDNVLGDV
MEALIGALYLEGGLEEARALVRRLWGNRVDTQTSAPRHPKSYLQEWAAANKRKPPEYVLT
DRSGPHHALRFTVTVAIKGAGEASATGASKQEAETAAAKALLEKLTG
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
ttgaagccgactacgcatgggccggacactgcgggctggttgaaggacctgatcggccgc
gtcccgataaatccggcgcggttcgatcaggcgctgacccatgggagcgccaaggcggtc
aattatgagcggctggaatttctgggcgaccgtatcctgggcctgctgatcgccgaatgg
ctgttcgaacgcttcaccgacgaaccggaaggcaagctctcccgtcgcttcaacgcgctg
gtgtcgggcgaaacctgcgccgaagtggcccgcacggccggcgttcccattcatctggtg
ctgggcaagcaggcgcgcgacgatggcgcggccgacagcgacaatgtgctgggcgacgtg
atggaggcgctgatcggcgccctctatctggaaggcggactggaagaagcgcgcgcactt
gtccgccgtctgtggggcaatcgggtcgacacccagaccagcgccccgcgccaccccaaa
tcctatcttcaggaatgggccgcggccaacaagcgcaagcctcccgaatatgtcctgacc
gaccgttccggcccgcaccatgcgctgcgcttcaccgtcaccgtcgccatcaagggcgcg
ggcgaagcctctgccaccggcgcctccaagcaggaagccgaaacggcggcggccaaggcg
ctgctggagaagctgacgggttga
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