Sphingomonas bisphenolicum: SBA_ch1_25110
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Entry
SBA_ch1_25110 CDS
T08354
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sbin
Sphingomonas bisphenolicum
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbin01011
]
SBA_ch1_25110
Enzymes [BR:
sbin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SBA_ch1_25110
Peptidoglycan biosynthesis and degradation proteins [BR:
sbin01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SBA_ch1_25110
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
BBF70311
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All DBs
Position
1:2555710..2557500
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AA seq
596 aa
AA seq
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MIRAATQISRFALIAMGLAPALPASAETAPVLPTLSTESSPLQLSDGDKARYRALFAAIQ
AQQWTDAKAMVAALDPQDAVRPLALSEIYLAKGSPRVELFDLLDLINKAAWLPKADQLSR
LAQKRGATILPTLPQIQKMVWLGAAPRRQYVAATKTDTLAQALAGQIQTHVKNDDPIGAE
GLLATGEAGLTSEGLTEVRQRVAWAYYIENDDGNARRMAARALETRTGGDWTVQAHWTTG
LASWRQNDCRTAAPAFANVAALAGDADMRAAGAYWASRAYMVCGEAEKVAAYLRQAARSD
ETFYGLLARESLGLPLGAAPVGSRFGALEWQKLRASPNARAAIALSAIGDNGRADELIRY
QAKIGGSDQYDALLRLASALNLPATQLWLAHNGPAGKQPDSFARFPAPDWRPDGGWRVDP
SLIYAHTLQESGFRSDVVSSAGARGLMQVRPGTAGDVGLTNASQLFVPSTNMEYGQRYLE
SLRDMSATGGLLPKVMAAYNAGPQPVDRWNTQVHDKGDPLLFMESLPYYETRAYVNIVMR
NYWMYQIQAKGSADCLTGMAQGMWPTFPNAKGVKLVRLSKADGRAQPSAAMGGGSD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
gtgattcgcgccgcgacccaaatttcccgtttcgccctgattgccatgggcctggccccc
gcgcttcccgccagcgccgaaaccgccccggtcctgccgaccctctcgaccgaatcttcg
ccgctgcaactgagcgatggggacaaggcccgctaccgcgccttgttcgccgcgatccag
gcgcagcaatggaccgacgccaaggcgatggtcgccgcgctcgatccgcaggacgccgtc
cgtccgctggcgctgtccgaaatctatctggcgaagggatcgccgcgggtcgaattgttc
gacctgctcgacctcatcaacaaggccgcctggctgcccaaggcggaccaactatcccgc
ctggcgcagaagcgcggcgcgactatcctgccgaccctgccccagattcaaaaaatggtc
tggctcggcgcagccccgcgccgccaatatgtcgccgcgaccaagaccgatacgctggca
caggcgctcgccggccaaatccagacccatgtgaagaatgacgacccgatcggcgcggaa
ggcctgctggccaccggcgaagcgggcctgacgtccgaagggctgaccgaggtgcgccag
cgcgtcgcctgggcctattatatcgaaaatgacgatggcaacgcccgccgcatggccgcg
cgcgcgctcgaaacccgaaccggcggcgactggacggtgcaggcgcactggaccactggc
cttgcgtcgtggcgccagaatgactgccgcaccgccgcaccggccttcgccaatgtggcc
gcactggcgggcgacgccgacatgcgcgccgccggcgcctattgggcctcgcgcgcctat
atggtctgcggcgaagcggagaaggtcgccgcctatctcaggcaggcggcccgttcggac
gaaaccttctacggcctgctcgcccgcgaatcgctcggcctgccgctcggcgccgcgccg
gtcggcagccgcttcggcgcgctcgaatggcagaagctccgggccagccccaatgcccgc
gccgcgatcgccctgtccgcgatcggcgacaacggccgcgccgacgaactgatccgctat
caggccaagatcggcggcagcgaccaatatgacgcgctgctgcgccttgccagcgccctg
aacctgcccgcgacccagctctggctcgcccataacggcccggcgggcaagcagcccgac
agcttcgcccgcttccccgcgcccgactggcgccccgatggcggctggcgcgtcgatccc
tcgctcatttacgcccacacgctccaggaatcgggcttccgctcggacgtcgtcagcagc
gcgggcgcacgcggcctgatgcaggtccgtcccggcaccgccggcgatgtgggcctcacc
aacgcatcgcaactcttcgtgccgtccaccaacatggaatatggccagcgctatctggaa
tcgctgcgcgacatgagcgcgaccggcggcctgctgcccaaggtgatggccgcctataat
gccggcccgcagccggtcgatcgctggaacacgcaggtccatgacaagggcgatccgctg
ctgttcatggaatcgctgccctattatgaaacccgcgcctatgtgaacatcgtcatgcgc
aactactggatgtaccagatccaggcgaagggcagcgccgattgcctgaccggcatggcg
cagggcatgtggccgaccttccccaatgccaagggcgtgaagctggtacggctcagcaag
gccgacggccgcgcccagccttccgccgccatgggtggcggttccgactga
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