Sphingomonas bisphenolicum: SBA_ch1_25300
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Entry
SBA_ch1_25300 CDS
T08354
Symbol
phrA
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sbin
Sphingomonas bisphenolicum
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbin03400
]
SBA_ch1_25300 (phrA)
Enzymes [BR:
sbin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SBA_ch1_25300 (phrA)
DNA repair and recombination proteins [BR:
sbin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SBA_ch1_25300 (phrA)
Prokaryotic type
SBA_ch1_25300 (phrA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
HTH_35
Motif
Other DBs
NCBI-ProteinID:
BBF70330
LinkDB
All DBs
Position
1:complement(2579889..2581130)
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AA seq
413 aa
AA seq
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MGGAARWWLHHSLARLDESLRDKGSRLILRRGRSAEVLAALAKEVGASRVHALHHYEPWW
RNAEKAVAKTLDLSLHDGGLLLPPGAVRTGAGGMYRIYTPFSRAVTEHMPPAAPHPAPHR
IDGPAHWPHGDSLDDWALLPTRPDWAQSFGADWTPGEQGARANVAHFMDEVGDYPTARNL
PSIEGTSRLSPHLHFGEVSPAYVWHRVESSGHDATIFLKELIWRDYAHVQICGLPAYGSE
NARSNFDALLWRDLREARTDFAAWKTGRTGYPIVDAGMRQLWTTGWMHNRVRMIAASFLI
KHLLIDWRHGARWFWDTLVDADYANNSVNWQWVAGSGVDANVFTRIMAPLTQSDKFDAAD
YIRSWVPELADLPDAAIHDPDAHGARPAAYPAKIIGHREGRERALTAYRRIKG
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgcggcgcgctggtggctgcaccatagccttgcgcggctggacgaaagcctg
cgggacaagggatcgcgcctgatcctgcgtcgtgggcgcagcgcggaggtgctggcggca
ttggcgaaggaagtcggggcgtccagggtccatgcgctgcatcactacgaaccctggtgg
cgcaacgcggaaaaggcggtggccaagacgctcgacctgagcctgcatgacggcggcctg
ctcttgccgccgggcgcggtgcggaccggggcgggcggcatgtatcgcatctacacgccc
ttttcgcgcgccgttacggagcatatgccgcccgccgcgccgcatcccgcgccgcaccgg
atcgatggaccggcgcactggccgcacggcgattcgctggacgattgggccttgctgccg
accaggccggactgggcgcagagtttcggggcggactggacgccgggcgagcagggcgcg
cgcgccaatgtggcgcatttcatggacgaggttggcgattatccgaccgcgcggaatctg
ccgtcgatcgaaggaacgtcgcgcctgtcgccgcatctgcatttcggggaagtgtcgccc
gcctatgtctggcaccgggtcgaatcttcaggccatgatgcaacgatcttcctcaaggag
ttgatctggcgtgattatgcacatgtccagatttgcggcttgcccgcttatgggtccgaa
aatgcgcgatccaatttcgatgcgctgctctggcgcgacctgcgggaagcacggaccgat
ttcgccgcatggaagacgggcaggaccggctatccgatcgtggacgccggtatgcggcag
ctttggacgacgggctggatgcataaccgggtgcgcatgatcgccgccagcttcctgata
aagcacctgttgatcgattggcgacatggcgcgcgctggttctgggatacgctggtcgat
gccgattacgccaataacagcgtcaattggcaatgggtcgcgggcagcggcgtcgacgcc
aatgtgttcacgcgaatcatggcgccgctgacccagtcggacaagttcgacgcggccgat
tatatccggtcatgggtgccggaactggcggacctgcccgacgcggcgattcacgatcca
gatgcccatggcgcgcgaccggccgcctatccggcgaagatcattggccatcgtgagggg
cgagaacgcgctctgaccgcctatcgtcgcatcaaggggtga
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