Sphingomonas bisphenolicum: SBA_ch1_29030
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Entry
SBA_ch1_29030 CDS
T08354
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sbin
Sphingomonas bisphenolicum
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbin03032
]
SBA_ch1_29030 (gyrA)
03400 DNA repair and recombination proteins [BR:
sbin03400
]
SBA_ch1_29030 (gyrA)
Enzymes [BR:
sbin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SBA_ch1_29030 (gyrA)
DNA replication proteins [BR:
sbin03032
]
Prokaryotic type
DNA Topoisomerases
SBA_ch1_29030 (gyrA)
DNA repair and recombination proteins [BR:
sbin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SBA_ch1_29030 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BBF70703
LinkDB
All DBs
Position
1:2947224..2949902
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AA seq
892 aa
AA seq
DB search
MTDETVLADPSDISPISIVDEMKASYLDYAMSVIVARALPDVRDGLKPVHRRILFSAQES
GFVYNRPYRKSARLVGEVMGKYHPHGDSSIYDALARMTQDWSMRVPLIDGQGNFGSMDPD
PPAAMRYTEARLAKVATALLDDLDKDTVDFTPNYDASESEPQVLPARFPNLLVNGAGGIA
VGMATNIPPHNLGEVLRACLAYIDNPGITTDELIAIVPGPDFPTAPLILGQSGARSAYHT
GRGSIMMRSRHVVEEGRGDRQSIVLTAIPYQVGKNGLVEKIAEAAKDKRIEGISDIRDES
SREGVRIVMDLKRDATPEVVLNQLWRNTPAQSSFPANMLAIRGGRPELLGLREIIEAFVK
FREEVITRRTKFELNKARDRAHILLGLVVAVSNLDEMVKIIRGSSSPAEARERLLAREWP
IGEIAPYLRLVEAIETDVHGDVYKLSDIQVRAILDLRLHRLTALGRDEIGKELAELAEAI
AEYLAILGDRVKLYAVMREELEAVEKEFATPRLSEITAAADGIEDEDLIEREEMVVTVTV
QGYIKRTPLESFRAQARGGKGRSGMATKDEDAVTELFVTSTHTPVLFFSTAGKVYRMKVW
RLPEGGPATRGRPMVNLLPLGPGETIRTVLPLPEDEDSWKDLHVMFATANGTVRRNSMDA
FANVPSNGKLAMRFDEGSDDRLIGVALLTEEDDVLLATRQGKAIRFAATDVREFQSRTST
GVRGMTLKNDDEVISLSILHRSGANQEQREEYLRFAPWKPEKDGEMGDQAMFALMKEREQ
FILTVCSNGYGKLSSAYDYRRTGRGGQGITNIDNIGRNGPVVASFAATQANQLMLVTDQA
KLIRMGLDSLRVIGRNSAGVRLFDVAKDEHVVSAAKIEESEDAESAETTPEA
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgacgagactgtcctcgccgacccttcggacatcagccccatctccatcgtagac
gagatgaaggcaagctatctcgactatgccatgtccgtcatcgtggcccgcgccctcccc
gatgtgcgcgacgggttgaagccggtgcatcgccgcattctcttctccgcccaggaatcg
ggcttcgtctacaaccgtccctatcgcaagtccgcgcgcctcgtcggtgaggtgatgggt
aaatatcacccgcacggcgacagctcgatctacgacgctttggcgcgcatgactcaggac
tggtcgatgcgggttccgctcatcgacggtcagggcaatttcggctcgatggaccccgat
ccgccagcggccatgcgctacaccgaagcgcgcctggccaaggtcgcgaccgcgctgctg
gacgatctcgacaaggacacggtcgacttcacgcccaactatgatgcatcggaaagcgag
ccgcaggttctgcccgcgcgcttccccaacctgctggtcaatggcgcgggtggcatcgcg
gtcggcatggcgaccaacatcccgccgcataatctgggggaagtgctgcgcgcctgcctc
gcctatatcgacaatcccggcatcacgaccgacgaactgatcgccatcgtccccggtccc
gatttccccaccgcgccgctgatcctgggccagtcgggcgcgcgcagcgcctatcatacc
ggccgcggctccatcatgatgcgctcgcgccatgtggtcgaggaagggcgcggcgatcgt
caatcgatcgtcctgaccgccatcccctatcaggtcggcaagaacggcctggtcgaaaag
atcgccgaagccgccaaggacaagcggatcgaaggcatcagcgacattcgcgacgagtcc
agccgcgaaggcgtgcggatcgtcatggacctgaagcgcgacgcgacccccgaagtcgtg
ctgaaccaattgtggcgcaacacgcccgcacaatcgagcttccccgccaatatgctggcc
atccggggcggccgccccgaattgctgggcctgcgcgagatcatcgaagccttcgtcaag
ttccgcgaagaggtcatcacccgccgcaccaagttcgagctgaacaaggcgcgcgaccgg
gcgcatatcttgctgggcctggtcgtcgcggtcagcaatctcgatgagatggtgaagatc
atccgcggatcgtccagcccggccgaagcccgcgaaaggctgctggcgcgcgaatggccg
atcggcgagatcgcgccctatctgcgcctggtcgaagcgatcgaaaccgatgtccatggc
gacgtctacaagttgagcgacattcaggtccgcgcgatcctggacctgcgcctgcatcgt
cttaccgctctgggccgcgacgaaatcggcaaggaattggccgaactggccgaagccatc
gccgaatatctcgccatattgggcgaccgggtgaagctctatgccgtcatgcgcgaagag
ctggaggcggtcgaaaaggaatttgcgaccccgcgcctgtccgaaatcacggccgccgcc
gacggcatcgaggacgaagacctgatcgagcgcgaggagatggtcgtcaccgtcacggtg
cagggctatatcaagcgcaccccgctcgaaagcttccgcgcccaggcgcgcggcggcaag
ggccggtcgggcatggcgaccaaggatgaggatgccgtcaccgaattgttcgtgacgtcg
acccatacgccggtcctgttcttctcgaccgccggcaaggtctatcgcatgaaggtgtgg
cgcctgcccgaaggcggcccggcgacgcgcggtcggccgatggtcaacctgctgccgctc
ggccccggcgaaaccatccgcaccgtgctgccgctgcccgaggatgaggatagctggaag
gatctgcacgtcatgttcgcgacggcgaacgggacggtacgccgtaacagcatggacgcc
ttcgccaatgtgccaagcaacggcaagctggccatgcgcttcgacgaaggcagcgacgat
cggctgatcggcgtcgcgctgctgaccgaagaggacgacgtgctgctcgccacgcgccag
ggcaaggcgatccgattcgccgcgaccgacgtgcgcgaattccagagccgcacctcgacc
ggcgtgcgcggcatgacgctgaagaatgacgacgaggtgatctcgctctccattctccat
cgctccggcgccaatcaggaacagcgcgaggaatatctccgtttcgcgccctggaagccg
gaaaaggatggcgaaatgggcgatcaggcgatgttcgccctgatgaaggagcgggagcag
ttcatcctgaccgtctgctccaatggctatggaaaattgtcgtccgcctatgattaccgc
cgcaccggccgcggcggtcagggcatcacaaacatcgacaatatcggccgcaacggcccg
gtcgtcgccagcttcgccgccacgcaggcgaaccagttgatgctcgtcaccgatcaggcg
aagctgatccgcatgggcctcgacagcctgcgcgtcattggacgcaattcggcgggcgtg
cggctgttcgatgtggccaaggacgaacatgtcgtgagcgccgccaagatcgaggaaagc
gaagacgccgaatcggccgagacgaccccggaggcatga
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