Sphingomonas bisphenolicum: SBA_ch1_29500
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Entry
SBA_ch1_29500 CDS
T08354
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin03030
DNA replication
sbin03430
Mismatch repair
sbin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SBA_ch1_29500 (dnaX)
03430 Mismatch repair
SBA_ch1_29500 (dnaX)
03440 Homologous recombination
SBA_ch1_29500 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbin03032
]
SBA_ch1_29500 (dnaX)
03400 DNA repair and recombination proteins [BR:
sbin03400
]
SBA_ch1_29500 (dnaX)
Enzymes [BR:
sbin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SBA_ch1_29500 (dnaX)
DNA replication proteins [BR:
sbin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SBA_ch1_29500 (dnaX)
DNA repair and recombination proteins [BR:
sbin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SBA_ch1_29500 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_30
AAA_16
AAA_14
AAA_19
AAA_24
AAA_assoc_2
PIF1
Glyco_tranf_2_5
DUF815
AAA_18
Adeno_E1B_55K_N
AAA_2
Cdc6_lid
Motif
Other DBs
NCBI-ProteinID:
BBF70750
LinkDB
All DBs
Position
1:complement(2997450..2999087)
Genome browser
AA seq
545 aa
AA seq
DB search
MSDSPQPYRVLARKYRPRSFRELIGQDAMVQTLGNAIRRGRLAHAFLMTGVRGVGKTSTA
RLIAKALNCIGPDGQGGPTIDPCGVCEPCVAIAEGRHIDVVEMDAASHTGVDDVREIIEA
VRYAAVSARYKIYIIDEVHMLSKNAFNALLKTLEEPPAHVKFLFATTEVNKVPVTVLSRC
QRFDLRRIPAELLAAHFAHVVEAESVAAEPDALALIAQAAEGSARDGLSILDQAIAHAEM
GPDGADGDAPMVSAAQVRDMLGLSDRGSVRRLLGLLLEGDTGALLGAVRDQYALGVEPLA
LMRGLMELVHAVTLAKAGRDIASPGQSAEEREALADWAAQLGFAPLHRLWQLLLKGHDEV
ANAVLPIESCEMALLRVMHAATMPDPGELARMLREGAPAMVAPASGGTPAAPSSAPAARL
PATMQEIVALIDRQKPLLANHLNDCAALVSLSPPDIAIRLTHSWTHGDFKRDLEQALNAA
TSGTRWVVTLAASGGEQTLLEQEQAVKAAARADILETPVVKAAIAAFPEAELVETDRPEA
WSAGQ
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattccccgcagccctatcgcgtcctggcgcgcaaatatcgaccgcgcagtttc
cgtgaactgatcgggcaggatgcgatggtccagacgctgggcaatgcgatcaggcgcggc
cggctggcccacgccttcctgatgaccggcgtgcgcggggtagggaagacctccaccgcg
cggctgatcgccaaggcgctcaactgcatcggcccggacgggcagggcgggccgaccatc
gacccctgcggcgtctgcgaaccctgcgtcgccattgccgagggtcggcatatcgacgtg
gtcgaaatggacgccgccagccacaccggcgtggacgatgtgcgcgagattatcgaggcg
gtgcgctatgccgccgtgtcggcgcgctacaaaatctacatcatcgacgaagtccatatg
ctctccaaaaacgccttcaacgcgctgttgaagacgctggaggagccgcccgcccatgtg
aaattcctgttcgccacgaccgaggtgaacaaggtgccggtgacggtgctgtcgcgctgc
cagcgcttcgaccttcgccgcatccctgccgaactgctcgccgcccatttcgcccatgtg
gtggaagccgaaagcgttgcggcggaacccgatgcgctggcgctgatcgcgcaggcggcc
gaagggtccgcgcgcgacggcctgtcgatcctcgaccaggcgatcgcccatgcggaaatg
gggccggatggcgcagacggcgacgcgccgatggtcagcgccgcccaggtgcgcgacatg
ctgggcctgtccgatcgtggatcggtgcgccgcttgctggggctgctgctggaaggcgat
acgggcgcgttgctgggcgcggtgcgcgaccaatatgcgctgggcgtcgagccgcttgcg
ctgatgcgcggcctgatggaactggtccatgccgtgaccctggcgaaggccggtcgcgac
atcgccagccccggccagtcggccgaagagcgggaagcgctggccgactgggcggcgcaa
ctgggcttcgcaccgctccatcgcctgtggcaattgctgctcaaggggcatgacgaagtc
gccaacgccgtcctgccgatcgaaagctgcgaaatggcgctgctgcgcgttatgcacgcc
gcgaccatgcccgatccgggcgaactggcgcggatgctgcgggagggggcgcccgccatg
gttgcgcctgcttccggtggaacgcctgccgcgccgtcctccgcgcccgccgcgcggctg
cccgctacgatgcaggaaatcgtcgcgctgatcgaccggcagaagccgttgctggccaat
cacctcaatgattgcgccgcgctcgtctcgctcagcccgcccgatatcgccattcgcctg
acccatagctggacgcatggcgacttcaaacgcgacctggagcaggcgctgaacgccgcg
acatccggaacccgatgggtcgtgacgctggcggcgagcggcggcgagcagacgctgctg
gagcaggagcaggcggtgaaggccgctgcgcgcgccgatatattggaaaccccggtggtc
aaggcggcgatcgccgccttccccgaagcggagttggtcgaaaccgaccggcccgaagca
tggagtgcaggacaatga
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