Sphingomonas bisphenolicum: SBA_ch1_30250
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Entry
SBA_ch1_30250 CDS
T08354
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin00220
Arginine biosynthesis
sbin00240
Pyrimidine metabolism
sbin00250
Alanine, aspartate and glutamate metabolism
sbin01100
Metabolic pathways
sbin01110
Biosynthesis of secondary metabolites
sbin01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SBA_ch1_30250 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SBA_ch1_30250 (carB)
00220 Arginine biosynthesis
SBA_ch1_30250 (carB)
Enzymes [BR:
sbin01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SBA_ch1_30250 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
CoA_binding_2
RimK
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
BBF70825
LinkDB
All DBs
Position
1:complement(3073409..3076744)
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AA seq
1111 aa
AA seq
DB search
MPKRTDISSILIIGAGPIIIGQACEFDYSGTQAVKALKEEGYRIILVNSNPATIMTDPEF
ADATYVEPITPEIVAKIIEKERPDAVLPTMGGQTALNTALALFNDGTLEKYGVQMIGADA
EAIDKAEDRIKFRDAMDKIGLESARSRIAHTMEEALEGLEFTGLPSIIRPSFTMGGTGGG
IAYNRDEFMTIVRGGLDASPTTEVLIEESLLGWKEYEMEVVRDRNDNCIIICSIENVDPM
GVHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEITNDITGATPASFEPTIDYVVTKIPR
FAFEKFKGAEPLLGTAMKSVGEVMAIGRNIHESMQKALRGLETGLSGFNTVDHLVGAPKD
DIVAALAAPTPDRLLVAAQALREGLSVQEIHNIAKFDPWFLERIKEIVDAEGEVLANGLP
RDADGMRRLKAMGFSDKRLAWLALKSANLAGNERGIARGSGLIHEAVVAMTGGVTEDEVR
ALRHKLGVRPVFKRIDTCAAEFEAKTPYMYSTYEAPIFGEAENESAPTNREKVVILGGGP
NRIGQGIEFDYCCVHACFALSDVGYETIMINCNPETVSTDYDTSDRLYFEPLTAEDVLEI
LSVEMSSGTLKGVIVQFGGQTPLKLAQALEDAGIPILGTSPDAIDLAEDRERFAALIDKL
KLKQPANGIARSREEAIAVANRIGYPVLMRPSYVLGGRAMEIVDGQAQLEEYITTAVKVS
GDSPVLIDQYLRDAIEVDVDALCDGDDVVVAGVLQHIEEAGVHSGDSACSLPPYSLSDDI
IAEIERQTEVLAHALSVRGLMNIQFAVKDGVVYLIEVNPRASRTVPFVAKAIGTPIAKIA
SRVMAGEKIKDLPKIDRNAINHVAVKEAVFPFGRFPGVDPVLSPEMKSTGEVMGIDSDFA
TAFAKAQIGAGTMLPTEGTVFISLKDSDKPVILPAARKLVDMGFRLIATGGTAQYLEEQG
IAVQRVNKVAEGRPHIVDKITDGDVQLIFNTTEGWQSLKDSKAIRTSALRQKVASFTTAA
ASVAAADAIEALRGHALEVRSLQSYYPLSQA
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgcaccgacatctcctccatcctcatcatcggcgctggtccgatcatcatc
ggccaggcgtgcgagttcgattattcgggcacgcaggcggtgaaggcgctcaaggaagag
ggctatcgcatcatcctggtcaattccaacccggccacgatcatgaccgacccggaattt
gccgacgcgacctatgtcgagccgatcacgcccgaaatcgtggcgaagatcatcgagaag
gaacggccggacgcagtgttgccgaccatgggtgggcagacggcgctgaacacggcgctc
gcgctgttcaacgacgggacgctggaaaaatacggcgtgcagatgatcggcgcggatgcc
gaagcgatcgacaaggcggaggaccggatcaagttccgcgacgcgatggacaagatcgga
ctggaatcggcccgctcgcgcatcgcgcatacgatggaagaggcgctggaggggctggag
tttacaggtcttccctcgatcatccggccgagcttcaccatgggcggcaccggcggcggc
atcgcctataaccgcgacgagttcatgacgatcgtgcgcggcggattggatgcgtcaccc
acgaccgaggtgctgatcgaggaatcgctgctcggctggaaagaatatgagatggaggtc
gtgcgggaccgcaacgacaattgcatcatcatctgttcgatcgagaatgtcgatccgatg
ggcgtccataccggcgactccatcaccgtcgccccggcgctgacgctgaccgacaaggaa
tatcagatcatgcgtaatgcatcgattgcggtactccgggaaatcggcgtcgaaacaggt
ggttccaacgtacagttcgcggtcaatcccaaggacggccgcctggtcgtgatcgagatg
aacccgcgcgtgtcgcgctcgtccgcgctggcctccaaggcgacgggcttcccgatcgcc
aaggtcgcggccaagctggcggtgggttatacgctggacgagatcaccaacgacatcacc
ggcgcgacgcccgcgtcgttcgagccgacgatcgactatgtggtgacgaagatcccgcgc
ttcgcgttcgagaagttcaagggcgccgaaccgctgctgggcaccgcgatgaagtccgtg
ggcgaggtcatggcgatcggccgcaacattcacgaatcgatgcagaaggcgctgcgcggg
ctggaaacgggccttagcggcttcaacaccgtcgatcatctggtcggcgcgcccaaggac
gatattgtcgcagcgctcgctgccccgacgccagaccggctgctggtcgccgcgcaggcg
ctgcgcgaaggcttaagcgttcaggaaatccacaatatcgcgaagttcgatccctggttc
ctggaacggatcaaggaaatcgtggacgcggaaggcgaagtgctggccaacggcctgccg
cgcgacgcggacgggatgcggcgcctgaaggccatgggcttttccgacaagcggctcgcc
tggctggcgctcaagtccgccaatctggcgggcaacgagcgcggcatcgcgcgcggatcg
ggcctgatccacgaagcggtcgtcgccatgaccggtggcgttaccgaggatgaggtccgt
gcgctgcgccacaagctgggcgtgcgcccggtgttcaagcgcatcgacacctgcgccgcc
gagttcgaggccaagacgccctatatgtactcgacctatgaagcgccgatcttcggcgag
gccgagaatgaatccgcgccgacgaaccgggagaaggtcgtgatcctgggcggcgggccg
aaccggatcgggcagggcatcgaattcgactattgctgcgtccatgcctgcttcgcgctg
agcgatgttggctatgaaaccatcatgatcaactgtaatcccgagacggtgtcgacggac
tatgacacgtcggaccgcctctatttcgaaccgctgacggccgaggatgtgctggaaatc
ctaagcgtcgaaatgtcgagcgggacgctcaagggcgtgatcgtccagtttggcggccag
acgccgctcaagctggcgcaggcgctggaggatgcgggcatcccgatcctgggcaccagc
cccgacgcgatcgacctggccgaagaccgcgagcggttcgccgcgctgatcgacaagctg
aaattgaagcagcccgccaacggcatcgcgcgcagccgggaagaggcgatcgcggtcgcc
aatcgcatcggctaccccgtcctgatgcggcccagctacgtgctgggcggccgggcgatg
gagattgtcgacggccaggcacaactggaggaatatatcaccaccgcggtcaaggtgtcg
ggcgactcgccggtgctgatcgaccaatatctccgcgacgcgatcgaggtcgatgtcgat
gcgctgtgcgatggcgacgatgtcgtcgtggccggcgtgttgcagcatatcgaggaggcg
ggcgttcattcgggcgacagcgcctgctcgctgccgccctacagcctgtcggacgacatc
atcgcggagatcgaacggcagaccgaagtgctggcccacgccctttccgtgcgcggcctg
atgaacatccagttcgcggtgaaggacggcgtcgtctatctgatcgaggtcaatccgcgc
gccagccggaccgtgcccttcgtcgccaaggcgatcggcacccccatcgccaagatcgcg
tcgcgcgtgatggccggagagaaaatcaaggatctgccgaagatagaccgcaacgcgatc
aatcatgtggcggtcaaggaagccgtcttccccttcggccgcttccccggcgtcgatccc
gtgctgtcaccggaaatgaagagcaccggcgaagtcatgggaatcgacagcgatttcgcg
accgccttcgccaaggcgcagatcggtgcgggcaccatgctgccgaccgagggtacggtg
ttcatctccttgaaggacagcgacaagccggtcatcctgcccgccgcgcgcaagttggtg
gacatgggcttcaggctgatcgcgaccggcggcaccgcccaatatctggaagaacagggc
atcgcggtgcagcgggtcaacaaggttgccgaggggcggccgcacatcgtggacaagatc
accgacggcgacgtgcaattgatcttcaacaccaccgaaggctggcagtccttgaaggac
agcaaggcgatccgcaccagcgcgttgcgccagaaggttgcgagcttcaccacggccgcc
gcgagcgtcgctgcggccgatgcgatcgaggctttgcggggtcatgcccttgaagtgcgc
tcgctccagtcctattatcccctgtcgcaagcctga
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