KEGG   Sphingomonas bisphenolicum: SBA_ch1_31670
Entry
SBA_ch1_31670     CDS       T08354                                 
Symbol
ku_2
Name
(GenBank) non-homologous end joining protein Ku
  KO
K10979  DNA end-binding protein Ku
Organism
sbin  Sphingomonas bisphenolicum
Pathway
sbin03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sbin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    SBA_ch1_31670 (ku_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbin03400]
    SBA_ch1_31670 (ku_2)
DNA repair and recombination proteins [BR:sbin03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SBA_ch1_31670 (ku_2)
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: BBF70967
LinkDB
Position
1:complement(3214948..3215856)
AA seq 302 aa
MAARPYWRGQIRLALVSIPVEIYSATKSGATIAFNQIHEPSGKRIKYEKVVPGIGPVDVE
DIVKGFEYAKGEYVLLDEKEIEGVKLESKKTLELTQFVDSHEIDAIYFEKPYYVVPADDL
AEEAFIVLREALRRSHKIGLGQLAMRGREYVVSIKACGRGLVMETLRYADEVNKAASYFR
EIGDADPDEELLDLATTLIDKKTGKFDASEFHDRYVDALKDLIERKKKGKTLNIDDDSDA
GSDPRGSNVVDLMAALKKSIGPAGGAAGAKTSAKKPAAKAAAKSEKAAAAKAPSKTPAKK
RA
NT seq 909 nt   +upstreamnt  +downstreamnt
atggcagcacgaccttattggcgaggccagatccggctggcgctggtttcgatcccggtc
gaaatttattcagcgaccaaaagcggcgcgacgatcgccttcaaccagattcacgagccc
tcaggcaagcgcatcaaatatgagaaggtcgtgcccggtatcggcccggtcgatgttgaa
gacatcgtcaagggcttcgaatatgccaagggcgaatatgtcctcctcgacgagaaggag
atcgagggggtgaagctcgagagcaagaagacgctcgagctcacccagttcgtcgatagt
cacgagatcgacgccatctatttcgagaagccctattatgtcgtgcccgccgacgacctc
gccgaagaggccttcatcgtgctgcgcgaggcattgcgccgcagtcacaaaatcggtctt
ggacagctcgccatgcgcggccgcgaatatgttgtcagtatcaaggcctgcgggcgcggc
ctggtcatggaaacgcttcgctatgccgacgaggtcaacaaggcggcgagctattttcgc
gagatcggcgacgccgatcccgacgaggaactgctcgacctggccaccacgctgatcgac
aagaagaccggcaagttcgatgcgagcgagtttcacgatcgctatgtcgacgcgctgaag
gacctcatcgaacgcaagaaaaagggcaagacgctcaatatcgatgacgacagcgacgca
ggctccgatccgcgcggcagcaatgtcgttgacctgatggcggcactcaagaaatcgatc
gggccggcgggcggcgcggcgggcgccaagacatcggccaaaaagccggccgccaaagct
gccgcgaagtctgagaaggcggccgcggcgaaagccccctccaagacgccggcaaaaaag
cgggcttga

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