Sphingomonas bisphenolicum: SBA_ch1_32060
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Entry
SBA_ch1_32060 CDS
T08354
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SBA_ch1_32060 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbin03032
]
SBA_ch1_32060 (dnaB)
Enzymes [BR:
sbin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SBA_ch1_32060 (dnaB)
DNA replication proteins [BR:
sbin03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SBA_ch1_32060 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_16
nSTAND3
AAA_22
AAA
NACHT
divDNAB
RuvB_N
IstB_IS21
NB-ARC
NPHP3_N
AAA_33
PadR
Motif
Other DBs
NCBI-ProteinID:
BBF71006
LinkDB
All DBs
Position
1:complement(3252986..3254470)
Genome browser
AA seq
494 aa
AA seq
DB search
MVELLKINPADNGGTELPRNVEAEAALLGAIMIDNRIAEDVQLKIKAEHFFEPLHGRIYD
AIMRLLDKDMIANPVTLKPMLDMDPALKELGGAGYLAQLTGNGAALIGARDFATQIYDLA
LLRELVNVGRELVENALDTSEAVNPREQIEAAEVALYKVSEGEGEGGSVKSFLMASTAAV
QVAERALNSGGHVSGITTGINSLNAKIGGLHNSDLMILAGRPGMGKTSLATNIAYNAASR
WLRDNADGIPAEKNMGAKTAFFSLEMSADQLATRVLAEQSGISGEALRMGKISRADFQNL
SRAARELQELPLFIDDTPGLTIAALRTRARRLKRRHDIGFIVVDYLQLLQGTGRGNENRV
NEISEISRGLKTLAKELHVPVLALSQLSRAVEQREDKRPQLSDLRESGSIEQDADMVWFV
FREDYYEAAKEPKPDDEAAYATWKENMERIYGLAEVIIAKQRHGSTGRIRMKFDAKITRF
SDIADDSYQDLNYE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaactgctgaaaatcaatcccgccgacaatggcggcaccgaattgccgcgcaac
gtggaggccgaagccgcgctgctgggcgcgatcatgatcgacaaccgcattgccgaggat
gtccagctcaagatcaaggccgaacattttttcgagccgctgcacggccgcatctacgac
gcgatcatgcgcctgctcgacaaggacatgatcgccaatccggtcacgctcaagcccatg
ctggacatggacccggcattgaaggaactgggcggggcgggctatctggcgcaactgacc
ggcaatggcgcggcgctgatcggcgcgcgcgacttcgccacccagatctacgatctggcg
ttgctcagggaactggtcaatgtcggccgcgaactggttgaaaatgcgctggacaccagc
gaagccgtcaatccgcgcgagcagatagaggcggccgaagtcgcgctctacaaagtgtcg
gagggcgagggcgagggtggttcggtcaagagcttcctcatggcctccaccgcggcggtg
caggtggcggagcgtgcgctcaacagcggcggtcatgtgtcggggatcacgaccgggatc
aacagcctgaacgccaagatcggcggcctgcacaattcggacttgatgatcctggccggt
cggccgggcatgggaaagacgtcgctggcgacgaacatcgcctataatgcggcgtcgcgc
tggttgcgcgacaatgccgacggcatcccggcggaaaagaatatgggcgccaagaccgcc
ttcttcagcctcgaaatgtcggccgaccagttggcgacccgcgttctggccgaacagtcg
ggcatcagcggcgaagcgctgcgcatgggcaagatcagccgggcggacttccagaatctg
tcgcgcgcggcgcgagagttgcaggaattgcctttattcatcgatgatacgccgggcctg
accatcgccgcgctgcgcacccgcgcgcgtcggttgaagcggcggcatgatatcggtttc
atcgttgtcgactatcttcagctattgcagggcaccggccgcggcaacgagaatcgcgtc
aacgagatttcggaaatctcgcggggtttgaagacgttggcgaaagaattgcatgttccg
gtgctggcgctgtcgcagctcagccgtgcggtggagcagcgcgaagacaaaaggccgcag
ctctccgacctgcgcgaatccggctcgatcgaacaggacgcggacatggtctggttcgtg
ttccgcgaggattattacgaagcggccaaggagcccaagcccgacgatgaggcggcctac
gccacgtggaaggaaaatatggagcgaatctacggcctggccgaggtcatcatcgccaag
cagcgccacggctccaccggccgcatccgcatgaagttcgacgcgaagatcacgcgattc
tcggacattgcggacgatagctatcaggatttgaactacgaataa
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