Sphingomonas bisphenolicum: SBA_ch1_33060
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Entry
SBA_ch1_33060 CDS
T08354
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sbin
Sphingomonas bisphenolicum
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbin02000
]
SBA_ch1_33060
Transporters [BR:
sbin02000
]
Other transporters
Pores ion channels [TC:
1
]
SBA_ch1_33060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Plug
Motif
Other DBs
NCBI-ProteinID:
BBF71106
UniProt:
A0ABM7G8H8
LinkDB
All DBs
Position
1:complement(3353439..3355811)
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AA seq
790 aa
AA seq
DB search
MSVISSIRRSARAALLFACATGALNAAHAQEPVGDESETITVTGRRISQSSEAIGEDKIS
NVVAVTREALLSAPSGISGLKMLEQLPGFNVQTDGALGLYEFGNSVQTRAFNLDQIGFVV
DGIPTGRSDAFGGSPVFRYVDNENLGVVEASVGAGDVGLPSYSTLGPVVQYNSIAPQDEM
GLFVSQSFGDDSLKRTFIRVNTGKVGPFKAYVSRTKLNSDLWRGPGTIDREHWEAQLHAD
LGGDSWARFKFVSNDFFDYDSPTLTRAQYNCASTNLVGQCGRDYAYLENVPNTTTGFAPT
VPGVYYSNSNYANVYNLAINVRKDRLYGATFHAGIADGVWAESTLYWEDKGGYGVSPDTY
ANSLTRYTAQVQAGLAVTAPKGVQYGRSGVGGNRYGIANKLHWEQGNNIVEAGLWAEVDK
YHRTQARYNTVDGAPDGEPNLDELVYLRRNYRSQRDTLQVSLKDTLKLMDDRLVLDVGFK
GLMLDYSLRGYRDFDDYYRVVGGVGVAGWGPQINSAHYRDMFLPMAGVLYKLDGRSQIFA
SYAENMALPKGMDDIYAVTRTGTSALVPQPNPERSKNMELGFRTNQGQVYASIAGYYTKF
KNRIQSITTFVEGGGASTETFYQNVGRVKAYGVEASGTYKPAFLNGLAYANANVTYNHAK
FQDDIVASVTYATAGKYIPDSAKWIVSGGVTIEPASWLVANISGKYTSKRWSTFTNTAGS
SVPAYTVFSGYVDIGDGFSLGPIKSVKARFNVDNIFDKDVLSFISSSVTGDGAFRPLSPR
TFQFTISGEI
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttatctcgtccatccgtcgttccgcgcgcgcggcgctactgttcgcctgcgcc
accggggcgctgaacgccgcccatgcgcaggaaccggtcggcgacgagagcgagacgatc
accgtcaccggccgccgcatctcgcaatcgtccgaagcgatcggcgaggacaagatcagc
aatgtcgtcgcggtgactcgcgaggcgcttttgtcggcgccgtcgggcatttcgggtctc
aagatgctggagcagctacccggcttcaacgttcagaccgacggggcgctcggcctctac
gagttcggcaacagcgtccagacccgcgccttcaatctcgaccagatcggcttcgtggtc
gacggcatccctacgggtcgcagcgacgccttcggcggcagtccggtcttccgctatgtc
gacaatgaaaatctgggcgtggtggaagcctcggtcggcgcgggcgacgtcggcctgccc
agctattcgacgctcggcccggtggtgcagtataacagcatcgcaccgcaggacgagatg
ggcctgttcgtgtcgcagagcttcggcgacgacagcctgaagcgcactttcatccgcgtg
aacaccggcaaggtcggtccgttcaaggcctatgtcagccgcaccaagcttaacagcgac
ctgtggcgcggccccggcacgatcgaccgcgagcattgggaagcgcaactgcacgcggat
ctgggtggcgatagctgggcgcggttcaaattcgtatcgaacgactttttcgactatgat
tcgccgaccctcacgcgcgcgcagtataattgcgcgagcaccaacctggtcggccagtgc
ggccgcgactatgcctatctggagaatgtgcccaacacgacgaccggcttcgcgccgacg
gtgccgggcgtctattattccaacagcaactacgccaacgtctacaatctcgccatcaac
gtgcgtaaggatcgcctctatggcgcaaccttccatgcaggaatcgccgacggggtatgg
gcggaatcgaccctttattgggaagacaagggcgggtacggcgtgtcgcccgacacctat
gccaattcgctgacccgctacaccgcacaggtgcaggccggcctcgccgtcaccgcgccc
aagggcgtgcaatatggccggtcgggcgtgggtggcaatcgctacggcatcgccaacaag
ctgcactgggaacagggcaacaacatcgtcgaggccgggctgtgggccgaagtcgacaaa
tatcaccgcacccaggcgcgctacaacacggtcgatggcgcgcccgacggcgaacccaat
ctggacgagctggtctatctgcgccgcaactatcgctcgcagcgcgatacgttgcaggtg
tcgctcaaggacacgctcaagctgatggacgaccggctggtgctggacgtgggcttcaag
gggctgatgctcgactacagcctgcgcggctatcgcgacttcgacgattattatcgcgtg
gtcggcggcgtcggcgttgccggctggggaccgcagatcaacagcgcccattatcgcgac
atgttcctgccgatggcaggcgtgctttacaagctggacgggcgcagccagatattcgcc
tcctatgccgagaatatggcgctgcccaaggggatggacgatatctatgccgtcacccgc
accggcacctccgcgctggtgccgcagcccaatccggagcgttccaagaatatggagctg
ggcttccgcaccaaccagggtcaggtctatgcctctatcgcgggctattacaccaagttc
aagaaccgcatccagtcgatcacgaccttcgtcgaaggcggcggcgcgtcgaccgaaacc
ttctaccagaatgtcggccgggtgaaggcctatggcgtcgaagccagcggcacctacaag
cccgctttcctcaacggcctggcctatgccaatgccaacgtcacctacaaccatgccaag
tttcaggacgacatcgtcgcgtcggtgacatatgccacggcgggcaaatatatccccgac
agcgccaagtggatcgtcagcgggggcgtgaccatcgaaccggcaagctggctggtcgcc
aatatctcgggcaaatataccagcaagcgctggtcgaccttcaccaacacggctggctcc
agtgtccccgcctataccgtgttcagcggctatgtggacattggcgacggcttcagcctg
ggtccgatcaagagcgtgaaggcgcggttcaacgtcgacaatatcttcgacaaggacgta
ttgtccttcatctcttcgtcggtgacgggcgacggcgcattccggccgctgtccccgcgc
accttccagttcaccatctcgggtgaaatctga
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