Sphingomonas bisphenolicum: SBA_ch1_35440
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Entry
SBA_ch1_35440 CDS
T08354
Name
(GenBank) TlyA family rRNA (cytidine-2'-O)-methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
sbin
Sphingomonas bisphenolicum
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbin03009
]
SBA_ch1_35440
Enzymes [BR:
sbin01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
SBA_ch1_35440
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
SBA_ch1_35440
Ribosome biogenesis [BR:
sbin03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SBA_ch1_35440
23S rRNA modification factors
SBA_ch1_35440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_12
Methyltransf_11
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
BBF71344
LinkDB
All DBs
Position
1:complement(3593964..3594701)
Genome browser
AA seq
245 aa
AA seq
DB search
MAKVRADQLLVDSGLAESRARAQALILAGLVFLGDRKVDKAGQQVPEGTELDVRGRDHPW
VSRGGIKLAHALEEFAIDVTGFVAIDVGSSTGGFTDVLLTKGAAKVYAVDSGTNQLAWKI
RSDDRVVVHEQTSARILTDAHIPEPVDIIVCDASFISLAKVLEKPIGFAKPGAQMVALIK
PQFEARREEVGKNGVIRDPAVHDRVCAEVQDWAVSQGWTVAGLTQSPITGPQGNVEFLLY
ARLGG
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggtgcgtgccgaccagctgctcgtcgacagcggccttgccgaaagtcgcgcg
cgcgcgcaggcgctgatcctggccggcctcgtcttcctgggcgaccgcaaggtcgataag
gccgggcagcaggtgcccgaaggcacggaactggacgtacgcggtcgcgaccatccctgg
gtgtcgcgcggcggcatcaagctggctcacgccctggaggagtttgccatcgacgtcacc
ggcttcgtcgccatcgacgtcggctcctcgaccggcggctttaccgacgtattgctgacc
aagggggcggcgaaggtctatgcggtcgacagcggtaccaaccagctcgcctggaagatc
cgctccgacgatcgcgtcgtcgttcacgaacagaccagcgcccgcatcctgaccgacgcg
catatccccgaaccggtggacatcatcgtctgcgatgccagcttcatcagcctggccaag
gtgctggaaaagccgatcggctttgcgaaacccggcgcgcagatggtcgccctcatcaag
ccgcagttcgaagcgcggcgggaggaagtgggcaagaatggcgtgatccgcgatcccgcc
gtccacgaccgggtctgcgccgaagtgcaggactgggccgtgtcgcagggctggactgtc
gcgggcctgacgcaaagcccgattaccgggccgcagggcaatgtcgaatttcttctctac
gcgcggcttggtggataa
DBGET
integrated database retrieval system
