Sphingomonas bisphenolicum: SBA_ch2_0960
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Entry
SBA_ch2_0960 CDS
T08354
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sbin
Sphingomonas bisphenolicum
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbin02000
]
SBA_ch2_0960
Transporters [BR:
sbin02000
]
Other transporters
Pores ion channels [TC:
1
]
SBA_ch2_0960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
Porin_2
Exotox-A_target
Motif
Other DBs
NCBI-ProteinID:
BBF71563
LinkDB
All DBs
Position
2:101383..103764
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AA seq
793 aa
AA seq
DB search
MRLTALKLALVASTAAVAFPSWAQSAASTAPQADDANAGDIVVTARRREERLQDVSVSIS
AFSSEALERSTVQTVSDVKTIAPGFTFSSEGGKDNVALTLRGIGQLPLGEVTPGVVIYLN
DTPLPSVGSNVPTYDIGSIQVLKGPQGTLFGRNTLGGAVVIGSQKPSYNFEGYVEGTYGR
FDYRELEGAVNIPIIEDKVAFRAAGQIRRQDPRTVAFDGGPGFDNIHQDAYRLSLLVEPF
EGLKSTTIYEYFKGDELAGGLYLLRENFPFAALGLGVVEPQVQAALQAQKANRRGSFDGG
INGGAAYRKTTSITNDTSFSFGDLTLRNIFGYRKNYSYQLINTGGLPQLQIPTGLPSPAP
SAVPFTLFTASSVLDRQYLTNETQLLGDFGSFNFIVGTFYNNDKPDGASGSQFTAFSVGG
VPAPAVTSHVRNKNWAVYGQIGYEFTDKLKLNLGARYSWDKVSACGGTIGTTYVDESTCL
STAALGLADGVGTVSNKGEEPSWTIGLDYKATPDWLLYIVSRRGYRGVNVNTPLFETPFT
TGGTDPACVATGGVCADLRPFQKTGEETITDVEIGSKYDYHVGSARGRLNIAAYYSKYKN
ALQFLNTQTTVPNGTPDSPTNGSLAANVADLRIWGVELEASISPVRSLTVGFNAAYTNVK
VESLTIPAGLPSTIVLGEGQINKYSPSFSGTASVSWTLPIRPADGDVVVNADLFMTDDFG
GQNGEKLPGYQLANARLDWRGIGGTGLDLGIYVKNLFNEKYFAASSVLLPSFPTSSVYAG
DPRTWGIMAKYTF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgaccgcactgaagttggcattggttgcgagcaccgcagcagtggcatttccc
tcatgggcgcagtccgccgcttcgaccgcgccgcaggcggatgatgcgaatgctggcgac
atagttgtcacggctcgtcgccgggaagaacgactgcaggacgtttcggtttccatttcc
gctttctcgtcagaggcgctggaacgcagcaccgtccagacggtaagcgacgtcaagacg
atcgcgcccggcttcaccttctcgtccgaagggggtaaggacaatgtggcgctgaccctg
cgcggcatcggtcaattgcccctgggcgaagtgacgccaggcgtcgtcatctatctcaac
gatactcccttgccgtcggtcggctcgaacgtgccgacttacgacatcggcagcattcag
gtgctcaaggggccgcagggcacattgttcggccgcaacacattgggcggcgcggtcgtg
atcggcagccagaagccgagctacaacttcgaaggctatgtcgagggcacctacggccgc
ttcgattatcgcgaactggaaggcgcggtgaatattccgatcatcgaggacaaggtcgcc
ttccgcgctgcgggccagatccgtcgtcaggatccccgtaccgtcgccttcgatggcggg
cctggcttcgacaatatccatcaggacgcctatcgtctctcgctgctggtcgaaccgttc
gagggcctcaagagcaccaccatctatgaatatttcaagggcgatgaactcgccggcggc
ctttatctgctgcgcgagaatttcccctttgccgcgctgggtctgggcgtcgtcgaacca
caggtacaggcggcgttgcaggcacagaaagccaatcgccgcggttcgttcgacggcggc
atcaatggtggcgcggcctatcgcaagaccacgtcgatcaccaatgatacgtccttcagt
ttcggcgatctgacgctgcgcaacattttcggttaccggaaaaattacagctatcagttg
atcaacaccggcgggctgccgcaactgcaaatccccacgggtctgccgtctcccgcgcca
tcggccgtgccgttcaccttgttcacggcgtcttccgtgctggaccggcaatatctgacg
aacgaaacccagttgctgggtgattttggctccttcaacttcattgttggcactttctac
aataatgacaaacctgacggtgccagcggatcgcagttcacggcattttccgtgggcggt
gtccctgcacctgcggtgacgtcgcatgtccgcaacaagaactgggcggtctatggccag
attggttatgaattcaccgataagctgaagctcaatctgggcgcgcgctatagctgggac
aaggtgtcggcctgcggcggcaccatcggcacgacctatgtcgacgaatccacctgcctc
agcacggcagccctgggtctcgcggacggcgtcggcaccgtatccaacaagggcgaggag
ccgagctggaccatcgggctcgactataaggcgaccccggactggctgctctatatcgtg
tcgcggcgcggctatcgcggcgtcaatgtgaacacgccactattcgaaacgccgttcacc
accggcggcacagatccggcctgcgtggcgaccggtggcgtctgcgcggatcttcgtccc
ttccagaagaccggggaggaaacgatcactgacgtcgaaattggttccaaatatgactat
catgtcggatcggcgcgcgggcgcctcaatatcgccgcctattacagcaaatataaaaat
gcgcttcagttcctgaatacgcagacgaccgttcccaacggcacgccggattcgccgacc
aacgggtcgctggccgccaatgtcgccgatctgcggatctggggcgtcgaattggaagcc
tccatcagccccgtgcgcagccttaccgtcggtttcaatgccgcctataccaatgtgaag
gtggaaagcctgaccattcctgcaggcctgccttcgacgatcgtgctgggcgagggccag
atcaacaaatattcgcccagcttttccggcaccgccagcgtgagctggaccctgccgatc
cgcccggctgacggcgacgtggtggtcaacgccgacctgttcatgaccgacgattttggt
ggtcagaacggcgaaaagctgccgggttaccagttggccaacgcgcgtctggactggcgc
gggatcggcggcacgggccttgatctgggcatttatgtgaagaaccttttcaacgagaaa
tatttcgcggcttccagcgttcttctgccgtccttcccaaccagttcggtttatgccggc
gatccgcggacctggggcatcatggcaaaatatacgttctga
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