Sphingomonas bisphenolicum: SBA_ch2_2020
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Entry
SBA_ch2_2020 CDS
T08354
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sbin
Sphingomonas bisphenolicum
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbin02000
]
SBA_ch2_2020
Transporters [BR:
sbin02000
]
Other transporters
Pores ion channels [TC:
1
]
SBA_ch2_2020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BBF71669
UniProt:
A0ABM7G9D4
LinkDB
All DBs
Position
2:complement(218682..220838)
Genome browser
AA seq
718 aa
AA seq
DB search
MTLKALLFAGVAIAAPLPCAAQTQQAPAADAGSSDIIVTARKRQETLLDVPVAVTAVSGD
TLARRNINSVREAAALAPGLNISSDGAGRAFVSIRGVGVTLVQSVQPGVGLFVDGIYRPN
TAYLNNPLLDVERIEVLRGPQGTLYGKNTLGGAINVITRQPGNAFEARGAASYAGPDNSW
LVSGSVSAPIVQDKLAIRVGGSHREQDGFINNSNIGGKANRFNTDSLSSTIRATPSEDLT
IVVNGYYDWVKGANVPYARVTGPTDYSRDNQFDTLGTTTYKYRGVNARIETPIDAINTKL
SLQAAYDARDTSAPDTDGDFGPSDATTAVPAVRQSSTDRLRTKTLELRFDTEYSDKFSTL
VGLFYSRETTRANQLTNIQLTLPLPTGPFPVAINNRAQNATKADTYAAFGTAFWKPNADW
EVALGLRYDHEDRQSVGIVNGGAPSRVGLKSNEVEPRLSVTRHWNRELMTYASVARGYRG
GGFNAVTAPIRVYKGDSAWTYEIGTKYASADRRVTLSGDIFYSDYKDYIGLNSIAPASTG
GLVTVDLNSGDVESYGAEIEFAFKPVEQWTLSGGLTYMHARLTDSSAYTAVTGRTLSSDR
LTFQPDWMVSLSSDYVVPLGDDSSLTLNAGLTGKGKRLAATLNQTTPTILKSYVLANGSI
TYRTGGIELALFGTNLFNKKYFDSYIEKTTLALAGLPASDLGIIGDLRRYGVRASFRF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgaaggccctcttatttgccggtgtcgcgatcgcggcgcctctgccctgcgca
gcacagacgcagcaggcgcccgccgccgacgcgggatcatccgacatcatcgtcaccgcg
cgcaagcggcaggaaacgctgctcgacgtgccggtcgcggtgaccgcggtgagcggcgac
acgctcgcccggcgcaacatcaattcggtgcgcgaagccgccgcactcgcccccggcctc
aacatttccagcgacggtgcgggccgcgccttcgtctcgatccgtggcgtgggcgtcacc
ctggtccagtcggtgcagcccggcgtcggcctgttcgttgacggcatctatcgtcccaac
accgcctatctcaacaacccgctgctcgacgtcgagcggatcgaggtgctgcgcgggccg
cagggcacgctctatggcaagaacacgctgggcggggcgatcaatgtcatcacccgccag
ccgggcaatgctttcgaggcccgcggcgcggccagctatgccgggccggacaatagctgg
ttggtgtctggttcggtgtccgccccgatcgtgcaggacaagctggcgatccgcgtcggc
gggtcgcatcgcgagcaggacggcttcatcaacaacagcaatatcggcggcaaggcgaac
cggttcaacaccgactcgctcagcagcaccatccgcgccacgcccagcgaagacctgacg
atcgtcgtgaacggctattatgactgggtgaagggcgccaacgtcccctatgcccgcgtc
accggcccgaccgactattcgcgcgacaaccagttcgatacgctgggcaccaccacctat
aaatatcgcggcgtcaacgcccgcatcgaaaccccgatcgacgcgatcaacaccaagctg
tcgctacaggccgcctacgacgcgcgcgacaccagcgcgcccgacaccgacggcgatttc
ggccccagcgacgcgaccaccgccgtccccgccgtgcgccagagcagcaccgaccgcctg
cgcaccaagacgctcgaactgcgtttcgacaccgaatatagcgacaagttctcaacgctc
gtcggcctgttctacagccgggagacgacgcgagcgaaccagctcaccaacatccagctc
accttgccgctgccgaccgggccgtttccggttgcgatcaacaatcgcgcgcaaaacgcg
accaaggcggacacttatgcggccttcggcaccgctttctggaagcccaatgcggactgg
gaagtggcgctcggcctgcgctacgaccatgaggaccggcaatccgtcggcatcgtcaat
ggcggcgcgccgtcgcgggtgggcctcaagtccaacgaggtcgaaccgcgcctgtcggtc
acccgccactggaaccgcgaactcatgacctatgcctcggtcgcgcgcggctatcgcggc
ggcggcttcaacgccgtgaccgcgccgatccgcgtctataagggcgattccgcctggacc
tatgaaatcggcaccaaatatgcgtcggccgatcgccgggtgaccctgtcgggcgacata
ttctacagcgattacaaggattatatcggcctcaactcgatcgccccggcctccaccggc
ggcctcgtcaccgtcgatctcaacagcggcgacgtcgaaagctatggcgccgaaatcgaa
tttgccttcaagccggtcgagcaatggacgctatcgggcggcctgacctacatgcacgcc
cgcctgaccgacagttcggcctataccgccgtcaccggccgcaccctgtcgagcgatcgg
ctgaccttccagcccgactggatggtcagcctgtcgagcgactatgtcgtgccgctcggc
gatgacagcagcctgaccctcaacgccggcctcaccggcaagggcaagcggctggccgcg
acgctgaaccagacgacgccgacgatcctgaaatcctatgtcctggccaacgggtcgatc
acctaccgcaccggcggcatcgaactggcgctgttcggcaccaacctgttcaacaagaaa
tatttcgactcctatatcgagaagacgacgctggcactggccggcctgcccgcatcggat
ctgggtatcatcggcgacctgcgccgctatggcgtgcgcgccagcttccggttctga
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