Sphingomonas bisphenolicum: SBA_ch2_5560
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Entry
SBA_ch2_5560 CDS
T08354
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase [NADP(+)] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin00250
Alanine, aspartate and glutamate metabolism
sbin00310
Lysine degradation
sbin00350
Tyrosine metabolism
sbin00650
Butanoate metabolism
sbin00760
Nicotinate and nicotinamide metabolism
sbin01100
Metabolic pathways
sbin01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SBA_ch2_5560 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SBA_ch2_5560 (gabD)
00310 Lysine degradation
SBA_ch2_5560 (gabD)
00350 Tyrosine metabolism
SBA_ch2_5560 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SBA_ch2_5560 (gabD)
Enzymes [BR:
sbin01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SBA_ch2_5560 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SBA_ch2_5560 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SBA_ch2_5560 (gabD)
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GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
BBF72023
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All DBs
Position
2:631791..633248
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AA seq
485 aa
AA seq
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MAVATSLKREACLIDGQWVTNGAWMDVDDPATGQVIGRVPMMGGPEAKSAIEAARSALPH
WSALAAHERAALLRTFAHLMIDRADALARLLSAEQGKPHSEALGEIHYSASYLDWFSEEA
RRIYGEIVPGHQRDKRIFVLRQPIGVVAAITPWNFPAAMVTRKIGPALAVGCTIILKPAE
QTPFTALAIGALAEEAGLPKGVLNIVTGDPVGIGATLTASPEVQKLSFTGSTATGAKLMA
QCAPTIKKVSLELGGNAPFIVFGDADIEAAVQGAIASKFRNAGQTCICTNRLFIQREIYE
CFAARFTEATCSLVVAPASDPNSQIGPLIDQRAMAKVKAHIADAVSKGAFVATGGVGHAE
GENFFTPTVLTHATADMCVMQEETFGPVAALASFDNEEDLIKTVNASPFGLAAYIYTRDV
SRAWRVSEKLETGMVGINTGLISTEVAPFGGVKASGLGREGGRQGIDDYVETKYICLHLD
PPSAS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgcgacaagcctgaagcgtgaagcctgcctgattgatgggcagtgggttacg
aatggagcatggatggatgtcgatgaccccgcgacggggcaggtcatcggccgcgtgcct
atgatggggggccccgaagcgaagtcggcgatcgaggccgcccgatcggcgcttccccat
tggtcggcactagccgcccatgaaagagcggcgctccttcgcacattcgcccacctgatg
atcgaccgggccgacgcccttgcgcgattgctcagcgcagaacagggcaagcctcacagt
gaagctttaggcgaaatccactattccgcgtcctatctcgactggttctccgaagaggca
aggcgcatctatggcgagatcgtaccagggcaccagagggacaagcgaatcttcgtcttg
cggcagcctatcggcgtcgtcgccgcgatcacaccatggaacttccccgcagcgatggtg
acgcgaaaaatcggccctgcattggcggtcggctgcaccatcatcctcaagccagccgag
caaacccccttcacagcgcttgcgatcggcgcgctggctgaggaagcgggcttgcccaag
ggggttttgaacatcgtcaccggagatccggtcgggatcggggcaactctcaccgccagt
cctgaagtccagaagctgagcttcacgggatcaactgccacgggcgcgaagctcatggcc
cagtgcgcacccacaatcaaaaaagttagcctggaactcgggggcaatgcgccttttatc
gtctttggcgatgcggacatcgaggctgctgttcagggcgccatcgcatccaaattccgt
aatgcagggcaaacctgcatttgcaccaaccggcttttcattcaacgggaaatctatgaa
tgcttcgcggcccgattcaccgaggccacctgcagcttggttgtcgctccagcaagcgat
cccaatagtcagatcggcccgctcatcgaccagcgggcgatggcgaaggtcaaggcgcat
atagcagacgctgtttccaagggcgcgtttgtggcgacgggtggagtgggccacgcggag
ggcgaaaatttcttcacgcctaccgtcctcacgcatgcaacggccgacatgtgcgtcatg
caagaagaaaccttcggtcccgtagcggcgcttgcgtcattcgataacgaagaggatctc
attaagacagtgaacgcatctccattcggcctagctgcctatatctacacccgcgatgtc
tcacgggcatggcgggtcagcgagaagctggaaaccggaatggtcggcatcaacaccgga
ttgatatcgacggaggtagcaccttttggcggcgtcaaagcctcgggcctcggccgggaa
ggcggcaggcagggtatcgatgactatgtcgaaaccaaatatatctgccttcatctcgac
ccaccgtccgcatcctaa
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