Sphingomonas bisphenolicum: SBA_pBAR3_1120
Help
Entry
SBA_pBAR3_1120 CDS
T08354
Name
(GenBank) type IV conjugative transfer system coupling protein TraD
Organism
sbin
Sphingomonas bisphenolicum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwB_AAD_bind
TraG-D_C
T4SS-DNA_transf
DUF87
FtsK_SpoIIIE
AAA_22
cobW
T2SSE
AAA_16
AAA_10
ABC_tran
AAA_7
AAA_33
AAA_19
SRP54
Pox_A32
AAA_29
NACHT
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
BBF72545
LinkDB
All DBs
Position
pBAR3:108994..111285
Genome browser
AA seq
763 aa
AA seq
DB search
MARKNDIRTDGRAIPLTHHSARGRVQRNSGNFTRGSQLLTHELLMWFSGAKLPILMWFFL
FAAAWFVIMSIKLDEHGFQLICMKIYAALWNWVDLNPNKRVNVTLPSGEVMRTVMPAVPY
IAEVIQAWKIAMKGLLAAFFVSIFITIPVALWFVDLSRRRGKTILQERHERGAMLVARHV
LLNEISQHNYAKFEEEAQDRLPGLAPAKILDMPFRARKAAGIHHPYTLAGIPYPHRTEQS
HTMLIGTTGSGKTTELRSLVSQMRAREDTAVIFDLTGAYVEAFYDSARDTILNPMDARCP
AWSIFNDCTTHSEFTAAAAALIPSDGGSAEPFWALAARTLFIEMCIRLQERGATTNLALS
ENLMTADLKRVHRFLANTIADPLTAPEAARMAESIRAVFNTNAQVLRFLPDEGPRFSICN
WITTEKKPGAILFITSNYVDLAMNRALLTLWMDIAINRLMTMPRTRDLRTWFMFDELGAL
HRLPAIENGLQTARAFGGAMILGIHSFEKLIEVYGEQGARNLASLARSKLMLATADLDTA
EQCARYIGNREVRQMDEAYSYGYNNTRDASTLTPRKQVEPLVIADDITNLPSMHGFVKFP
DGFPAARIQLQWKDYPQVAQGFIARPNLQPVRSRRGEEAFEGSDGGEAGGRDGAAQVIGE
VADPVNLAKELAANILSAEVEDEHDEAARRAQRATESDERPATPTHAADKAQAARAATED
PQSVPRDRDGRGQPAPAPQVEDQTLVELRQAFGREDDGMDMGI
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtaaaaacgacatccgcacagacggccgggccatccccttgacccatcacagc
gcgcgcggacgcgtgcagcgcaattcgggcaatttcacccgcggctcgcagcttctcacc
cacgaacttctgatgtggttctcgggcgcgaaactgcccatcctgatgtggttcttcctg
ttcgcggccgcctggttcgtgatcatgtcgatcaagctcgacgagcacggcttccagctc
atctgcatgaagatttatgccgcgctctggaactgggtcgacctcaaccccaacaagcgc
gtcaacgtcaccctgccgagcggcgaggtcatgcgtacggtgatgcccgcggtgccttat
atcgccgaggtcatccaggcctggaagatcgcgatgaaaggccttctggcggccttcttc
gtatccatcttcatcaccatcccggtcgcactctggttcgtcgatctttcgcgccggcgg
ggcaagacgatccttcaggaacgccacgagcgcggagccatgctggtcgcccgccacgtg
cttctcaacgagatcagccagcacaattacgcgaagttcgaagaggaggcgcaggatcgc
ctgcccggcctcgccccggccaagattctcgacatgccgtttcgtgcacgcaaggcggcg
ggcatccatcacccctatacgcttgcgggcatcccttatccgcatcgcaccgagcagtcg
cataccatgctcatcggtacgaccggatcgggcaagacgaccgaactcaggagcctggtt
tcgcagatgcgagcccgcgaggacacggccgtcatcttcgatctcaccggcgcctatgtc
gaagccttctacgattccgcgcgcgatacgatcctcaacccgatggacgcgcgctgcccg
gcctggtcgatcttcaacgactgcaccacgcatagcgaattcactgctgcggcggcagcg
ctcattccctcggacggcggctctgccgaacccttctgggcgctcgcggcgcgcaccctc
ttcatcgagatgtgcatccggctccaggagcgcggcgcgacgaccaatctcgcgctttcc
gagaacctgatgacggccgacctgaagcgggttcaccgcttccttgccaacacgatcgcg
gacccgctcaccgcgccggaagcggcacgcatggcggaatcgatccgcgcggtcttcaat
accaatgcgcaggtgctgcgcttccttcccgacgaggggccacgcttctcgatctgcaac
tggatcacgaccgagaagaagcccggcgcgatcctgttcatcacctccaactatgtcgat
ctggcgatgaaccgggcgctgctgacgctgtggatggacatcgccatcaaccgtctcatg
accatgccgcgcacccgcgatctgcgcacctggttcatgttcgacgaactcggcgcactc
catcgtctgcccgcgatcgagaacggtctccagaccgcccgcgcgttcggcggcgcgatg
atcctggggatccacagcttcgaaaaactgatcgaggtctatggcgagcagggtgcccgc
aatctcgcctcgctcgcgcgctccaagctcatgctcgcgaccgccgatctcgacaccgcc
gagcaatgcgcgcgctacatcggtaaccgcgaagtgcggcagatggatgaagcctatagc
tacggctacaacaacacgcgcgacgcctcgacgctgacgccgcgcaagcaggtcgagccg
ctcgtcatcgcggacgacatcaccaacctgccctcgatgcatggtttcgtgaaattcccc
gacggctttcccgccgcgcgcatccagctccagtggaaagactatccccaggtcgcccag
ggcttcatcgcccggcccaatctccagccggtgcgatcaaggcgcggagaggaggcgttc
gaggggagcgatgggggcgaagcgggcgggcgcgatggcgccgcgcaggtgatcggggag
gttgccgatcccgtcaatctggccaaggaacttgccgccaatatcctgtcggccgaggtc
gaggatgagcatgatgaagcggcccgccgggcgcagcgtgcgaccgagagcgacgagcgg
ccagcaacccccacgcacgccgccgacaaggcacaggcagcgcgcgctgcgaccgaggat
cctcagagcgtgccgcgcgatcgcgacgggcggggtcaacctgcgccagcgccccaggtc
gaggatcagacgctggtcgagctaaggcaggcgttcgggcgcgaggacgacggcatggac
atggggatctga
DBGET
integrated database retrieval system
