Shewanella bicestrii: CF168_00125
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Entry
CF168_00125 CDS
T05197
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sbj
Shewanella bicestrii
Pathway
sbj00071
Fatty acid degradation
sbj00280
Valine, leucine and isoleucine degradation
sbj00310
Lysine degradation
sbj00362
Benzoate degradation
sbj00380
Tryptophan metabolism
sbj00410
beta-Alanine metabolism
sbj00640
Propanoate metabolism
sbj00650
Butanoate metabolism
sbj00907
Pinene, camphor and geraniol degradation
sbj00930
Caprolactam degradation
sbj01100
Metabolic pathways
sbj01110
Biosynthesis of secondary metabolites
sbj01120
Microbial metabolism in diverse environments
sbj01200
Carbon metabolism
sbj01212
Fatty acid metabolism
Module
sbj_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CF168_00125 (fadB)
00650 Butanoate metabolism
CF168_00125 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
CF168_00125 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CF168_00125 (fadB)
00310 Lysine degradation
CF168_00125 (fadB)
00380 Tryptophan metabolism
CF168_00125 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CF168_00125 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CF168_00125 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CF168_00125 (fadB)
00930 Caprolactam degradation
CF168_00125 (fadB)
Enzymes [BR:
sbj01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CF168_00125 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CF168_00125 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CF168_00125 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CF168_00125 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ASK67386
UniProt:
A0A220UHK6
LinkDB
All DBs
Position
complement(27379..29529)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQQSNIQALVLTSG
KDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCET
ILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPEDALK
VGAVDAVVAPEALEAAAIQMLKDAVAEKLDWQARRQRKMSPLTLPKLEAMMSFTTAKGMV
FAVAGKHYPAPMAAVSVVEQAATKGRSDALQIEHQAFIKLAKTDVAKALIGIFLNDQLVK
GKAKKAGKLAKDVKSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLGEAAKLL
SAQVARGRSTPEKMAKVLNNITPALDYAPVKHADVVVEAVVEHPKVKAQVLAEVEQYVSE
DAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKSGNDAIDVMFENKRLGQKNGKGFYAYSVDSRGKP
KKDVDPTSYELLKAAFGEQKAFDADEIIARTMIPMIIETVRCLEEGIVASPAEADMGLVY
GLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRALAANNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacaattcaggttgagttactcgaggataatattgccaagctg
tgctttaacgcacccggttcggtgaacaaattcgacagagaaacactcgcctcactcgat
gccgcattagatagcattaagcaacaatcaaacattcaggctttagtgctgacctcaggt
aaagatacctttatcgtgggtgccgacattactgaatttttaggcttattcgcacaggat
gatgcggtactgctctcttgggttgaacaggccaacgccgtattcaacaaactcgaagat
ttacctttcccaaccgcttcagcgattaaaggttttgccctaggcggcggttgtgaaact
attctggcaacggatttccgtatcgccgacaccacagccaaaatcggcctgcccgaaacc
aaactgggcatcatccctggctttggtggcacagtgcgcttaccacgtgtgattggtgcg
gataacgcactagaatggatcaccacgggaaaagatcagcgtccagaagatgccttaaaa
gtcggtgcggttgatgccgttgttgcgccagaggctttagaagccgcagctattcaaatg
ctaaaagatgcagttgcagaaaagcttgattggcaagcccgtcgccaacgtaagatgtca
ccactgaccctaccaaaactcgaagctatgatgtctttcactacagctaaaggcatggtg
tttgcggttgcgggtaaacactacccagcaccaatggcggcagtcagtgtagtcgaacaa
gctgcgaccaaaggccgcagcgatgcactacaaattgaacatcaagcgtttatcaagtta
gcgaaaaccgatgttgccaaggcgttgatcggtatcttcttgaatgaccaattagtcaaa
ggcaaggccaagaaagcgggcaaactcgccaaagatgtgaaaagcgccgccgtattaggt
gctggcatcatgggtggcggtatcgcttaccaaagcgccagcaaaggcacgccaatcgtg
atgaaagatatcgctcaaccggcattagatttaggtttaggcgaagccgccaaactgtta
tctgcacaagttgctcgcggccgctctaccccagaaaaaatggctaaggtgctaaacaac
atcactccagccttagactatgctccagtaaaacatgctgacgtggttgtcgaagccgta
gttgagcatccaaaagtgaaggcacaagtactggcggaagttgaacagtacgtaagtgaa
gatgcgattatcgcctctaacacgtcaaccatttcaatcaacctgctcgcgaagagcatg
aagaagcctgagcgtttctgcggtatgcacttcttcaaccctgtgcataaaatgccattg
gttgaagttattcgtggcgagcacagctcagaagaaaccatcgcatctgttgttgcctac
gccagcaaaatgggtaaaaccccaatcgttgttaacgattgcccgggtttcttcgttaac
cgcgtactcttcccgtactttgcgggctttaacggcctgctcgccgaaggtggcgacttt
gccgctatcgataaagtgatggaaaaacaattcggctggccaatgggtcctgcttacctg
ctagacgttgtcggcctagacacgggtcaccacgcgcaagcggtaatggccgaaggcttc
cccgatcgtatgggcaaatctggcaatgacgcgattgacgtgatgtttgagaacaagcgt
ctcggtcagaagaatggtaaaggtttctacgcttactctgtagatagccgtggtaaacca
aagaaagatgtcgacccaaccagctacgagctgctgaaggccgcctttggtgagcaaaaa
gcattcgatgcggatgaaatcatcgcccgcactatgatcccaatgattatcgaaaccgtt
cgctgtttagaagaaggcattgtggcttctcctgccgaagcggatatgggcttggtctat
ggtttaggtttccctccattccgtggtggtgtattccgttacttagatactatgggcgta
gcgaactttgtcgccttagcagacaaatacgctcacttaggtggtttgtatcaagtcacc
gacgccatgcgtgcccttgcagccaacaacggtagctactaccaagcctaa
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