Shewanella bicestrii: CF168_00440
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Entry
CF168_00440 CDS
T05197
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbj
Shewanella bicestrii
Pathway
sbj00061
Fatty acid biosynthesis
sbj00071
Fatty acid degradation
sbj01100
Metabolic pathways
sbj01212
Fatty acid metabolism
sbj02024
Quorum sensing
sbj04146
Peroxisome
Module
sbj_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CF168_00440
00071 Fatty acid degradation
CF168_00440
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CF168_00440
09145 Cellular community - prokaryotes
02024 Quorum sensing
CF168_00440
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbj01004
]
CF168_00440
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbj04147
]
CF168_00440
Enzymes [BR:
sbj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CF168_00440
Lipid biosynthesis proteins [BR:
sbj01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CF168_00440
Exosome [BR:
sbj04147
]
Exosomal proteins
Exosomal proteins of breast milk
CF168_00440
Exosomal proteins of breast cancer cells
CF168_00440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ASK67442
UniProt:
A0A220UHR2
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All DBs
Position
92510..94303
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AA seq
597 aa
AA seq
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MSLEQYHVIRLLQQQSQSLKEAIALEGFEMAAPWHQVSWQAFDQISHKIAQVLIELGVQV
QDRCVILSQNCPQWTCADIGTLKSRAVVVPIYPTSTLEQASFIINDAAAKVIFVDDAKQY
ALACELQKQCPTLEHVIVFDASVELAQDKAQHQHLDSLLAKEYGQSAELEQRLQDANLDD
LLTLIYTSGTTGDPKGVMLDYRNMASTVRQHDQILPFTTGDVSLAFLPLSHVFERGWSFY
VLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEKVYSAVQDKVAKSAEGRKKLFAW
AMGVGERQFEVSQGRAKGGLWLSLQWRLAHKLVYSKLQAVLGGRLKFMPCGGAALDLNVA
SFFHAIGIPVLCGYGMTETNATVTCNTLDNRVAGSNGKVLPEIEVKLGKDDEILVRGDTV
MRGYYNRPEDTAAAFEDGWLKTGDAGRLDANGNLFITDRIKELMKTSNGKYIAPQRVEGT
VGRCPFIEQVAVIADARNYVTALIVPAFESLEAWAKDKGLKYESPIELLRHSHVVEHFEQ
RLKHLQQELAGFEQIKKFTLLPEAFSMEAGLITPTLKLRRKMIYHKYAHEINAMYNN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgaacaatatcacgtaattcgactattacagcagcaaagccagtcattaaaa
gaggctatagcgctggaaggttttgaaatggctgcgccttggcatcaagtcagttggcag
gcattcgatcaaatcagccataaaattgcacaggtgttgattgaacttggcgtacaagtg
caagaccgttgcgtgatcctgtcgcaaaactgccctcaatggacctgcgccgacataggt
actctgaaaagtcgtgccgttgtggtccccatttacccgaccagcaccttagagcaagcc
agctttatcattaacgatgcggcggctaaggtgatttttgtcgacgatgctaagcaatat
gcgctggcctgtgagctgcaaaaacagtgtccgaccctagagcatgtgattgtgttcgac
gcgagtgttgagctggcgcaggacaaggctcaacatcagcatttagacagtttgttagcc
aaagaatatggccagagtgctgagcttgagcagcgcttacaggatgccaatctcgacgac
ctgttaaccctgatttatacctctggtactacgggcgaccctaagggcgtgatgctggat
taccgcaatatggcttcgactgtgcgtcagcacgatcagatcctgccgtttaccactggc
gatgtgtcgttagctttcttaccgctaagccatgtgtttgagcgtggttggagcttctac
gtgctgtgccgtggcggccacaacgtgtatctgcaaaacactcaaagagtgaaagaggcc
atcagcgccgtgcgtccacataccctgtgcgtggtgccgcgtttcctcgagaaggtttac
agcgcagtacaggataaggtcgctaaatccgccgaaggccgtaaaaaactgtttgcctgg
gccatgggcgtcggcgagcgtcaatttgaggtgagccaaggccgcgctaagggcggtttg
tggttatccttgcaatggcgtttagcgcacaagctggtttacagcaagttgcaagccgtg
ctcggtggacgcttaaagtttatgccctgcggtggcgccgccctcgatttaaacgtagcg
tctttcttccatgccattggtattcccgtactttgtggttacggcatgacggaaacgaac
gccactgtgacctgtaataccctagataatcgagttgcgggttcgaacggtaaagtcttg
cccgaaatcgaagtgaagctaggtaaggacgatgagattttagtccgtggcgacactgtg
atgcgcggttattacaatcgccccgaagacactgcagctgccttcgaagatggctggtta
aagaccggcgatgcgggacgactcgatgccaatggcaatttatttattaccgaccgcatc
aaagagttaatgaaaacctccaacggtaaatacattgctccgcaacgggttgaaggcaca
gtgggccgttgcccctttatcgaacaagtggctgtgattgccgatgcccgtaactatgtg
acggcgctgattgtaccagcctttgaatccctcgaagcctgggccaaggataagggcttg
aaatacgagtcgcctatcgagctgctgcgtcacagccatgtggttgaacatttcgagcag
cgcttaaagcatttacagcaagagttggcgggttttgagcaaatcaagaagtttaccctg
ctgcctgaagccttttcgatggaggcgggattaatcaccccgacgctgaaattgcgccgc
aaaatgatttaccacaagtacgcccatgaaattaatgctatgtacaataattga
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