Shewanella bicestrii: CF168_00915
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Entry
CF168_00915 CDS
T05197
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
sbj
Shewanella bicestrii
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbj03016
]
CF168_00915 (trmA)
Enzymes [BR:
sbj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
CF168_00915 (trmA)
Transfer RNA biogenesis [BR:
sbj03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
CF168_00915 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_4
Methyltransf_25
Methyltransf_15
PrmA
TRM5-TYW2_MTfase
Methyltransf_31
MTS
Methyltransf_11
DREV
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
ASK67532
UniProt:
A0A220UI02
LinkDB
All DBs
Position
complement(206718..207815)
Genome browser
AA seq
365 aa
AA seq
DB search
MNLAAMDPTTYDAQLTAKRIKLEQAFAQFETPSVEVFASEPAHYRMRAEFRVWHEGDDLY
YYMFDKVLNDKVRCDQYLPASALINQMMAALIAELKPNHSLRHKLFQVDFLSTLSGEILV
SLLYHRQLDDQWRSEAAALKARLSSQFKVNIIGRARKQKIDLDKDFVVESLQVNDKVFHY
KQIENSFTQPNAKVAIKMLEWAIDVTQNSQGDLLELYCGNGNFSIALAQNFNRVLATELA
KPSVDAAQYNIEVNNINNLQIIRMSAEEFSDAMAKKRSFRRLEGIDLDSYVCNTIFVDPP
RAGIDPATLELVQGYERILYISCNPDTLKDNLRQLNQTHKVTRFALFDQFPYTDHMETGV
LLERR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagcagcaatggatcccacgacctatgatgcgcaattaactgcaaagcgtatc
aagctagagcaggcctttgcccaatttgagacaccgagtgttgaagtgtttgcctcagaa
cctgcccactatcggatgcgtgccgagtttcgcgtatggcacgagggcgacgatttatac
tattacatgttcgataaagtattgaacgacaaagttcgttgcgatcaatacttacccgcg
agtgccttaatcaatcagatgatggcggctctgatcgccgagttaaaaccgaaccacagc
ctacgccataaactcttccaagttgattttttatcaacgctcagtggtgagattttagtg
tccctgctgtatcacagacagcttgatgatcaatggcgcagcgaagccgctgcacttaaa
gccagattgagtagccaatttaaggtcaatatcattggccgtgcgcgcaaacagaaaatc
gatttagataaagactttgtggttgagtcactgcaagtgaatgacaaagttttccattac
aaacaaatcgaaaacagctttacccagccaaatgccaaagtggctatcaagatgctggag
tgggctatcgacgtgactcaaaatagccaaggcgatttactggagctttactgtggtaat
ggcaacttctccatcgcactggcacaaaactttaatcgcgtgctcgcgaccgagttggct
aaaccttcagtcgatgctgcccaatacaatatcgaagtcaacaatatcaataatctgcag
attatccgtatgtcggcggaagaatttagcgatgcgatggcgaaaaaacgcagttttaga
cgcttagaaggcatagatctggatagctatgtctgcaacaccatttttgtcgaccctcca
cgagcaggtatcgaccctgccacgttagagttagtgcaaggttatgagcggatcctgtat
atctcttgtaatcccgacaccttgaaagacaatttgcggcaattaaatcagacccataaa
gtcacccgttttgccctgttcgatcaattcccttataccgatcatatggaaacaggtgta
ctgcttgagcgtcgttaa
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