Shewanella bicestrii: CF168_01910
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Entry
CF168_01910 CDS
T05197
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sbj
Shewanella bicestrii
Pathway
sbj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CF168_01910 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbj03019
]
CF168_01910 (recQ)
03400 DNA repair and recombination proteins [BR:
sbj03400
]
CF168_01910 (recQ)
Enzymes [BR:
sbj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CF168_01910 (recQ)
Messenger RNA biogenesis [BR:
sbj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CF168_01910 (recQ)
DNA repair and recombination proteins [BR:
sbj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CF168_01910 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ASK67710
UniProt:
A0A220UI88
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All DBs
Position
407945..409768
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AA seq
607 aa
AA seq
DB search
METQLLDIHDDPLSQRLAQVFGYRDFRDGQREVIERVCSGEDCLVIMPTGGGKSLCYQLP
ALLMPGITIVVSPLISLMKDQVDSLLQTGVNAAYLNSSQPREQSLEVLRQLHRDELKLLY
VSPERLLTADFIERMRSLPLSMFAIDEAHCISQWGHDFRPEYAALGQLKQLFPHVPMMAL
TATADQATRQNICERLGINPFKLLSSFDRPNIRYTVAEKLNAANQLRQFLLQQNGSSGIV
YCSSRRRVDEVAERLTLQGFHAKAYHAGMTPQERGEVQDSFLKDQIDIVVATVAFGMGIN
KSNVRFVVHYDIPKSIEAYYQETGRAGRDGLEAEAFMLFDPADIGRVRHLIEQSEPGPQQ
QVDFHKLNTMAAFAEAQTCRRQVLLHYFDESALEPCGNCDICLDPPKRYNGTEDAQKVLS
CIYRLGQRFGINHLIEVLRGSKGAAIVDRGHDKLSTWGIGKDKSHEYWLSVIRQLIHLGL
ASQDITRGSSITLNPSSRPILKGEVALMLAEPRIQLTNIKRKVTQSRAPLNYDRKLFARL
KALRRTIAEEQDVPPYLVFNDATLAEMAAMMPTSPGEMLAVNGVGERKLSRFGNDFLDEI
AAYLAGE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcagttactcgacatacatgatgatccgctgtcgcaacgcctagcgcaggtg
tttggttaccgtgactttagggacggtcagcgcgaggttatcgaacgtgtatgcagtggt
gaggactgccttgtgatcatgcccactggcggcggtaagagtctgtgttaccagttgcct
gcactgctgatgcctggcattactatcgtggtatcaccactgatttcattgatgaaagat
caggtcgatagcctgttgcagacgggtgttaatgccgcctatttaaactcatcgcagccg
cgggaacaaagtttagaggtgcttaggcagttgcatagagacgagctaaaactgttgtat
gtgtctcctgagcggttgctgacggccgattttatcgagcgcatgcgctccctgccgcta
tccatgtttgccattgacgaggcgcactgcatcagtcaatggggacacgattttcgtccc
gaatatgccgcccttggccagttaaagcagttatttccccatgtacctatgatggcgctc
accgccacagcggatcaggcgacacggcaaaatatttgcgagcgcctagggattaatcct
tttaaattactatcgagtttcgatcgacccaatattcgctatacggttgccgaaaaactc
aatgccgctaatcagttacgacagtttttactgcaacaaaatggcagtagtggcattgtc
tactgcagcagtcgacgccgtgtggatgaggtggcagaaagactcaccctgcaagggttt
catgctaaggcataccatgcgggcatgacaccacaagagcgcggtgaagtgcaggatagt
ttccttaaagatcaaattgatatcgtcgttgccaccgtggcctttggcatggggattaac
aaatctaacgtgcgctttgtggtccattacgatatcccgaagagcatcgaagcctattat
caagaaactggccgagcgggccgtgatggactcgaggccgaagcttttatgctgtttgat
cctgccgatattggtcgagtgcgccatcttatcgagcaatctgagccagggccgcagcag
caggtggatttccataaactcaataccatggctgcatttgctgaagcgcaaacctgtcgc
cgccaagtgttgctgcattacttcgatgaaagcgcgttagagccctgcggcaactgcgat
atttgtctcgacccacctaagcgttataacggcactgaggatgcgcagaaggtactttct
tgcatttatcggctcgggcaacgctttggtatcaatcacttgattgaagtattgcgtggc
tccaagggtgccgcaattgtcgacagaggacacgataaactcagcacttggggcataggc
aaagacaaaagccatgaatattggttgagtgttattcgtcagctcatccatttgggactg
gcgagccaagatattactcggggctcatccatcaccttaaatccttcgtcaagaccgatc
cttaagggcgaggtggcgctaatgttggcagagccgcgtattcaactgacgaacattaag
cgcaaagtcactcaatcgcgagcaccgctgaattacgaccgcaaactgtttgcgaggcta
aaagccctacgtcgcacgattgcagaggagcaggatgtaccgccatatttggtgtttaac
gatgcgaccttagcggaaatggcggccatgatgcctaccagtcccggtgagatgttggca
gttaacggggtcggtgagcgcaaactcagccgatttggcaacgatttcctcgatgagata
gccgcttatttagcgggggaataa
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