Shewanella bicestrii: CF168_02570
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Entry
CF168_02570 CDS
T05197
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
sbj
Shewanella bicestrii
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbj03019
]
CF168_02570
03009 Ribosome biogenesis [BR:
sbj03009
]
CF168_02570
Messenger RNA biogenesis [BR:
sbj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CF168_02570
Ribosome biogenesis [BR:
sbj03009
]
Prokaryotic type
rRNA processing factors
CF168_02570
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
DUF8260
Motif
Other DBs
NCBI-ProteinID:
ASK67828
UniProt:
A0A220UI16
LinkDB
All DBs
Position
553468..554976
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AA seq
502 aa
AA seq
DB search
MNTGRLNPNKVQRKMGSELLINVTPSEARVALVEHGVLQEVHIERRMKRGLVGNIYKGKI
SRVLPGMQAAFVDIGLDKAAFLHASDIVPHTECVADVEKGHFVVRDIAELVRQGQDIMVQ
VVKDPLGTKGARLTTDITLPSRYLVFMPGSSHVGVSQRIEQEEERSRLKKITLPFVDEDG
GFIIRTAAEGVGEDELAQDAAFLRRVWSKVSERRQRRGVALLYQDLALPVRIVRDFVGTE
LDRIQVDSRRTFAELQAFAQEFMPEIADKIEHYSGPAPIFDLYDVENEIQRALGRKVELK
SGGYLIIDQTEAMTTVDINTGAFVGHRNLEETIFNTNLEATQAIARQLRLRNLGGIIIID
FIDMLSDEHKTRVLNSLNSALAKDRVKTNVSGFSGLGLVEMTRKRTRESLEHVLCGECPA
CQSTGSMKTVETVSYEIFREIIRLNRAYDADEFLLYCSPAVYNSLSGDESHLVAELEVYI
GKRIRLQNEPMYSQHKYDVVMM
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
gtgaataccggtcgcttaaatccgaataaagttcagcgcaagatgggttcagaattactg
attaacgtaaccccatctgaggcacgtgtggctctggttgagcatggcgtgttgcaagaa
gtccatatcgagaggcgcatgaagcgcggtctagtgggcaatatttacaaaggcaaaatc
agccgtgtgttgcccggcatgcaagccgcctttgtggatataggcttagataaagccgca
tttttacatgcctccgacatagtgccgcacaccgaatgcgtggccgatgtggaaaaaggc
cattttgtggtccgtgatatcgccgagttggttcgccaagggcaagatattatggtgcag
gtggtaaaagatccgctcggcactaaaggtgcgcgcctgaccacagatatcacactgcct
tcccgttatctagtatttatgcccggctcaagccatgttggggtctcccagcggattgag
caggaagaagagcgcagtcgtcttaagaaaatcactctgcctttcgtcgatgaagacggc
ggctttattatccgcaccgccgccgaaggcgtaggtgaggacgaacttgctcaggatgcg
gcttttttgcgccgagtatggtctaaggtctccgagcgtcgtcagcgccgtggcgtggca
ctcttatatcaagatctcgccctgccggtacgcattgtgcgcgactttgtgggaaccgaa
ttagatagaattcaagtcgattcgcgccgtacctttgccgagctgcaagccttcgcccaa
gagtttatgccggaaatcgccgacaagattgagcactattcagggcctgcaccaattttc
gatctctacgatgtggagaatgaaatccagcgcgcactgggtcgcaaggtcgaactcaaa
tcgggtggctatctgattatcgaccagaccgaggccatgaccacggtcgatatcaacaca
ggtgcctttgtcggccaccgtaatcttgaagaaaccatcttcaacactaacctcgaagcg
acccaagcgattgcgcggcagctgcggctacgtaacctcggcggcatcatcattatcgac
tttatcgatatgctgagtgacgagcataaaacgcgggtactcaatagcttaaatagcgcg
ctcgctaaagacagagtcaagacgaatgtcagtggcttctcgggtcttgggttagtcgaa
atgactcgtaagcgcacccgagaaagcttggagcacgtgctgtgcggtgaatgcccagcc
tgtcagagcacgggtagcatgaagacggttgaaacggtttcctacgaaattttccgcgaa
atcatccgcttgaatcgagcctatgatgccgatgagtttttgctttactgctcgcccgct
gtatataacagcttaagtggcgatgaaagtcatctggtcgccgagcttgaggtctacata
ggtaaacgcattcgcctgcaaaatgagcccatgtattcccagcacaaatacgacgtggtg
atgatgtag
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