Shewanella bicestrii: CF168_03340
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Entry
CF168_03340 CDS
T05197
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
sbj
Shewanella bicestrii
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbj03009
]
CF168_03340
Ribosome biogenesis [BR:
sbj03009
]
Prokaryotic type
ribosomal protein modification factors
CF168_03340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
GNA1162-like
Motif
Other DBs
NCBI-ProteinID:
ASK67974
UniProt:
A0A220UI95
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Position
742373..744559
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AA seq
728 aa
AA seq
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MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCK
SRDIPTDNIRLSQNNIVDPEDRYNQIFQINVELPDDISDKDREGILRSIDRCTVKKVVQT
GPEFRIETVENLDADANAMLMGQPGDDSSTYILGKDLPLEQTIANMTGILAELGMKIEIS
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGVE
IASSEFVHYPNEKWFALEEDDSLPAGLLDDYCLEIYNPDEELCGSHLIDTNSGNRDRGIC
AIPYKRKSDGETVYFPSNLIENLFLSNGMSAGNNIKEAEVQCLSEIFERAVKRQIIEQEI
VLPDVPMSVLEKYPSILAGIKGLEEQGFPVVVKDASLGGQFPVMCVTLMNPKTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVSEPENFVEHFIDSTGVISWRF
FSSKHDYEFCEWDFSGTNQEEADRLFGILEDLGKEVYVAEFTELGASACRILVPDYSEVY
PVEDLIWDNTNKALDYREDILNLHSLSTKQLVNLVNRLEESQLDNYTDIRTLIGIVFDEN
TVWGKLTIIELKILIYLALGAHEEALELVGEFLQFNDNTVKRNLFFQAMSAVLEVTLDED
LELEDFSHNFTRMFGAEVMEQVVGSVTGKVRFSGLTKTSMQLEGIEPHLRLIESYKKLHA
ARKAKAAQ
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagttaattttctcgacaacctgagactcgaagcaaagttcgacgatttt
acggtaacggccgatcagcccatccgttataagggcgatggctcggcgccgagtcccttc
gactacttcttagcttcttcggcattgtgcgccgcctactttgtgaaggtatattgtaaa
tcccgcgatattccgacggacaatatccgtctgtcacaaaacaatattgtcgacccagaa
gatcgctacaaccagattttccagatcaatgtcgaattacccgatgatatttcggataaa
gatcgcgaaggtattttgcgctctatcgaccgctgcacagtgaaaaaagtcgtgcagact
ggcccagaatttagaatcgaaaccgttgaaaacctcgatgccgatgccaatgccatgttg
atgggtcagccaggcgacgacagcagcacctatatcttgggtaaagacttaccgttggag
cagaccattgccaatatgaccggcattttggctgagctggggatgaagattgagatctcc
tcatggcgcaatattgtgcccaacgtgtggtcactgcatatccgtgatgctgcatcgccg
atgtgttttaccaatggtaaaggcgcaaccaaagagagcgcgctgtgctcggccctcggt
gagtttatcgagcgtttaaacaataacttcttctataacgatcaattctttggggttgag
atcgcaagcagcgagtttgtgcattatcccaacgaaaagtggtttgccttagaagaggat
gattcgctgccagcgggcctgttagatgactactgcctagagatttataaccccgatgag
gagctgtgtggctcgcatcttatcgacaccaactcgggcaatcgtgaccgtggtatttgt
gcgattccgtacaagcgtaaatccgatggtgagacggtgtacttcccatcaaacctgatt
gaaaacctgttcttaagcaatggtatgagcgcgggtaacaacatcaaagaagccgaagta
cagtgtctgtctgaaatcttcgagcgcgcggtgaaacgccaaattatcgagcaagaaatc
gttctgccagacgtgcctatgtcggtgttagaaaaatacccaagcattcttgcgggcatt
aagggcttagaagaacaaggcttccctgtggtagtgaaagacgcctccttaggcggccag
ttcccagtcatgtgcgtgacgctgatgaacccgaaaaccggtggagtatttgcctccttc
ggtgctcacccaagctttgaagtggcattggagcgcagcctgaccgaattgctccaaggt
cgcagttttgaaggcttaaacgatgtaccaaaaccgacctttaacagcatggcggtgagc
gagcctgaaaactttgttgaacactttatcgactcaacgggtgtgatctcctggcgcttc
tttagcagcaagcatgattatgagttctgcgaatgggatttctctggcaccaaccaagag
gaagcggaccgcttattcggcattttagaagatctcggtaaagaggtgtatgttgccgaa
tttaccgaattaggcgcatcggcttgtcgtattttagtgcctgattactcagaagtttat
ccagtagaagacctgatttgggataacaccaacaaggcgctggattaccgtgaagatatt
ctgaatctgcattctttaagcactaagcaattggttaacctagtcaatcgtttagaagaa
agtcagctcgataactacacagatattcgtaccctgattggtatcgtcttcgatgaaaat
actgtctggggtaagttgacgattatcgaacttaagatcctgatttatctggcactcggc
gcgcatgaagaagcactggaattagtcggtgagttcctgcaatttaacgataataccgtg
aagcgtaatctgttcttccaagcaatgagcgcggtattggaagtgacgctggatgaagac
cttgaactcgaagactttagccataactttacccgcatgtttggcgcggaagtgatggaa
caagtggtcggtagcgttacgggtaaagtccgtttcagcggtttaactaagaccagcatg
cagctcgaagggattgagccacatttacgcttaatcgagagctataagaaactgcatgcc
gcccgcaaggccaaagcggcgcaataa
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