Shewanella bicestrii: CF168_03505
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Entry
CF168_03505 CDS
T05197
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
sbj
Shewanella bicestrii
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbj02000
]
CF168_03505
Transporters [BR:
sbj02000
]
Other transporters
Pores ion channels [TC:
1
]
CF168_03505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
YhdP
Motif
Other DBs
NCBI-ProteinID:
ASK68006
UniProt:
A0A220UJC5
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Position
complement(786322..788598)
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AA seq
758 aa
AA seq
DB search
MKQNTIKMSCIALAISSALAAQYAVAEDENSAGEKQATLERIEVTARKSIESLQNVPVAV
TSVSADDLAENGISVMTEIQQFSPNTTLQSSRGTNSTLTAFIRGVGQEDPLWGYEPGVGI
YIDDVYIARPQGAVLDILDVQRIEVLRGPQGTLYGKNTIGGAVKYVTKKMSGDAELNLNA
TIGSYNQQDYKIAGQLPLIDNKLYIGGAFASLNRDGYGDFITSALPDQDTENYNKDVMAG
RVSLEYTPTDDLFMRLNYDKTTDESNSKGGYRMLPSVLTDAPVPDSKYDSYTSMPTWNKV
ETEGWGLTIEYGLNDDWTLKSVTSSRESYSPTNIDFDNTSLRILDVPAIYDDEQFSQEFQ
ANYDGDNLKLVSGLYYFKGDSCGMFDSILYEYYKAYGGLTREVRGCNNSESYAAYAQGSY
DITDKLSMTAGLRYTRETKDATVYNGIMFTTLYPETGWIPGYVRDEDAINASIPKVLDDE
ETWSKLNPRLGLEYQLSDDMMLFTSYSQGFKSGTFNPRATGPEPAVDPEVVDSYELGMKS
EWFDRLRVNATAFYLDHKDRQFVTVLPGENASDLNQRLGNIGKSTATGLELEVEYAATES
LNLFATLGLIDASFEEVISYDSDGNRIDISDTYTITNTPDTTANVGFSYNIDTDIGSFVA
NGNYYYRSDYDLAVVNNLLSQDGYGLLNLGLNWYSNDGHWQAGLHWKNVTNEEYLVGNYA
FVTPDGNGGYIPGLGGDNTLIGYYGDPETISLTVGYNF
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagaatactatcaaaatgagttgcattgctttagctatctcatctgcattggca
gcacaatatgctgtcgctgaggatgaaaatagcgccggggagaagcaagccaccttagaa
cgcattgaagtcaccgctcgtaagtccattgagagcctgcaaaacgtaccagttgcagtg
acctcggtcagtgctgacgatttggcggaaaatggcatcagcgtgatgactgaaatccag
caattttcacccaacaccacactgcaatccagtcgcggcactaactctaccctcacggcc
tttattcgcggtgtcggccaggaagatccgctctggggctatgagcccggcgtcggtatc
tatatcgacgatgtgtatatcgcccgcccacagggcgcggtactcgatatcctcgatgtg
caacgtatcgaagtactgcgtggtccacagggcaccctctatggtaaaaataccatcggc
ggcgcggtcaaatacgtgaccaagaagatgagcggtgacgctgagttaaacctcaatgcc
accatcggcagctacaaccagcaagactacaagatagcaggtcaattacctttaattgat
aacaagctgtatattggcggcgccttcgcaagcttaaatcgcgatggttatggtgacttc
attacctcagcattaccagaccaagatactgaaaactataacaaagatgttatggcgggc
cgtgtgagcttagaatacacgccaaccgacgatctgtttatgcgcctcaactacgacaaa
accacagatgagtcgaattcaaaggggggctaccgtatgctccccagtgtcctgaccgat
gccccagtaccagacagcaaatacgattcctacaccagtatgccaacctggaacaaagta
gaaaccgaaggttgggggctgaccattgaatacggcttgaacgatgattggacactgaaa
tccgtgacctcatcccgtgagagctattcgcccaccaacatcgactttgacaacaccagc
ctgcgtattttggacgttccagccatctacgatgacgagcaatttagtcaggaatttcaa
gctaactacgacggcgataatttgaaactcgtctcaggcctttattactttaaaggcgat
tcctgcgggatgttcgattccatcctgtatgaatattacaaagcttacggtggtctcact
cgtgaagttcgtggttgcaacaacagtgaaagctatgccgcctacgctcagggctcttac
gacatcactgataaattgtcgatgaccgcaggtttgcgttatacccgcgaaacgaaggat
gccactgtctataacggcatcatgtttacaacgctttatcccgaaacaggctggatccca
ggatatgttcgcgatgaagatgccatcaacgccagtattcctaaggtgttagatgatgaa
gaaacctggtcgaaactcaatccacgcttaggtttagagtaccaactcagcgacgatatg
atgctctttaccagctattcacagggcttcaagtcgggcacctttaacccaagggcaaca
ggtccagaacccgcagtagacccagaagtcgttgattcctatgagctgggtatgaagagt
gaatggtttgacaggctgcgagttaacgcaaccgccttctacttagaccataaagacaga
cagttcgtgaccgtattacccggtgaaaacgcgtccgatcttaaccaacgtctaggcaac
attggtaaatcgacggccacgggtctagaactcgaagtggaatacgccgcgactgagtca
ttgaatctgttcgcgactctgggcttaatcgatgctagcttcgaggaagtgatctcctac
gatagcgatggaaaccgcatcgatatcagcgacacttacactatcaccaacaccccagat
accacggcaaacgttggatttagctacaatatcgacacggatatcggcagctttgtggcc
aacggtaactactactatcgcagcgactacgacttagccgtagtaaataacctgctgagc
caagacggttatggcctgctaaacctcggcttgaactggtatagcaacgacggtcactgg
caagcgggtctgcattggaaaaacgtcactaacgaagaatatctggtcggtaactacgcc
ttcgtcaccccagatggtaatggcggatatattccaggtttaggcggtgacaatacatta
attggttattatggcgatccagagactatctctctcaccgttggctataatttctag
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