Shewanella bicestrii: CF168_04980
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Entry
CF168_04980 CDS
T05197
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
sbj
Shewanella bicestrii
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sbj03110
]
CF168_04980 (clpB)
Chaperones and folding catalysts [BR:
sbj03110
]
Heat shock proteins
HSP100
CF168_04980 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_14
AAA_24
TniB
nSTAND3
AAA_18
bpMoxR
ATPase_2
IstB_IS21
AAA_7
NBD_SMAX1
DUF815
AAA_25
NACHT
AAA_19
AAA_6
Motif
Other DBs
NCBI-ProteinID:
ASK68279
UniProt:
A0A220UJG7
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Position
1119584..1122157
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AA seq
857 aa
AA seq
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MRLDRMTNKFQLAISDAQSLALGRDHQFIEPLHLMMALLNQDSGSIHPLLTQAGIRVSAL
RSLLSQELERLPQVEGTGGDVQLSQGLIRLLNLCDKLAQKRKDKYISSELFVLAALEGSD
ALAQCLKKSGATKELLEQTIEQVRGGQNVDDPNAEDQRQALKKFTVDLTERAEQGKLDPV
IGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSL
DMGALIAGAKYRGEFEERLKAVLNELAQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLK
PALARGDLHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELH
HHVEITDPAIVAAATMSHRYVSDRKLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRAI
QLKLEEQALAKENDEASRRRLEHLRVELHEVEAKASELNEIWRTEKAALAGTQHIKADLE
QARMDLEVARRAGDLTRMSELQYGRIPELEKQLDLASQAEMQDMTLLRNKVTDLEIAEVL
SKATGIPVSKMLEGEREKLLQMEVALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGS
FLFLGPTGVGKTELCKSLAKFLFDTESALVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL
GSDIIQEGFGHLSYSEMKSAVMNVVTHSFRPEFLNRIDESVVFHPLDAENIKHIASIQIA
SLRKRLAEKDYTLEITDEALSLIAEIGFDPVYGARPLKRALQQEMENPLAQKLLRGDLLP
GKPIKVSCAGGELVFEQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcgatcgtatgaccaataaatttcagcttgccatctcagatgcccagtcgctc
gcgctcgggcgtgatcatcagtttatcgaaccgttacatttgatgatggcgctgctcaac
caggattctggttctatccatcctttattaacccaagctggcattcgggtgagtgcgctg
cgctcgctgttgagccaagagcttgaacgtctaccgcaggtcgaaggcactggcggcgat
gtacaattatcccaaggtttaattcgcttattaaacctgtgcgacaagttggcgcaaaag
cgcaaagacaaatatatctccagtgagttgtttgttttagcggcactcgagggcagcgat
gccttggcgcaatgcttaaagaaatcaggcgccaccaaagagctgctcgagcaaaccatt
gagcaagtgcgcggcggtcagaatgtggatgatcctaacgcggaagatcaacgccaagcg
ctgaaaaagtttaccgtcgatctcactgagcgtgccgaacaaggcaaacttgaccctgtg
attggtcgcgacgatgaaatccgccgcactattcaagtgctgcaacgtcgtagtaaaaac
aacccagtgctgattggtgagcctggcgtgggtaaaaccgcgattgttgaaggcctcgcg
cagcgaattgtgaacggtgaagtgcctgaagggattaaaaataaacgcgttttatcctta
gatatgggcgcactgattgcgggcgctaaatatcgtggcgagtttgaagagcgtttaaaa
gccgtgcttaacgagctggcgcaggaagaaggccaagtgatcctctttatcgacgagctg
cacactatggtgggcgcgggtaaaggcgatggcgccatggatgcgggcaatatgctaaag
cctgcgctggcccgtggcgatcttcactgtgtgggtgcgaccactctcgacgaatatcgt
caatatattgaaaaggatgccgcccttgagcgccgcttccaaaaagtattagtggatgag
cctagcgtggaagataccatcgcgattttgcgtggcctcaaagagcgctacgagctgcat
caccatgtggaaattaccgatccggcgattgtggcggcggccaccatgtcgcaccgatat
gtgtcggaccgtaaattacccgataaagccatcgacttgattgacgaggcggcatcgagc
atccgtatgcagatggattctaagcctgaatccctcgacagattggagcgccgtgctatc
cagttgaaactggaagagcaggcattagccaaagaaaacgatgaggcgagccgccgtcga
cttgaacatttacgtgtcgagttgcatgaggttgaggctaaggcgtcggagcttaatgaa
atctggcgcaccgaaaaagcggcgcttgcagggactcagcatattaaagccgaccttgag
caagcgcggatggatttagaggtggcgcgccgcgcgggcgacttgacccgtatgtccgag
ctgcaatatggccgtattcccgagcttgaaaagcaactggacttagcatcgcaagccgaa
atgcaggacatgacgctgctacgcaataaagtcactgacttagaaattgccgaagtgctc
tcaaaggcaacggggattccggtttctaagatgcttgaaggcgagcgtgaaaaactgctg
caaatggaagtggcactgcatgagcgggtgattggccaaaacgaagccgtggatgctgtc
gccaatgcgattcgccgtagccgcgcaggacttgccgatccgaatcgtcctattggttcg
ttcctgttcttaggaccaaccggagtgggtaaaactgagttatgtaagtcgttggctaag
ttcctcttcgatacggaatcggccttagtgcgcattgacatgtctgaatttatggagaaa
cacgcggtttcccgtttagtgggggcgcctcctggctatgtcggctatgaagagggcggt
tacttaaccgaagcggtgcgtcgcaagccttattcggtgatattgctcgatgaggtggaa
aaggctcacccagacgtgttcaacattctgctgcaggtgctggatgatggccgcttaacc
gatggtcaaggtcgtaccgttgactttagaaatacggtgatcatcatgacctcaaactta
ggctctgacattatccaagaaggattcggtcacctaagttacagcgaaatgaagagcgcg
gtgatgaatgtggttacccatagctttagacccgagtttctaaaccggatcgacgagtca
gtggtattccatcccttggatgcggaaaatatcaagcatattgcatctatccaaattgct
tcattgcgtaagcgtttggcagagaaagactatacgctggagatcaccgacgaggcatta
tcgttaatcgcagaaattggtttcgacccagtctatggcgcaaggccgctgaaacgtgcc
ttacagcaagagatggaaaacccattagcgcaaaaattactgcgtggcgatttactgccc
ggcaaaccgattaaggtcagttgcgccggtggtgagttggtattcgagcaataa
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